Information for motif34


Reverse Opposite:

p-value:1e-17
log p-value:-4.045e+01
Information Content per bp:1.965
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets421.4 +/- 318.5bp
Average Position of motif in Background500.1 +/- 329.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCACGATT------
TTTTACGACTTTCCAT

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TCACGATT--
NNAATTCTCGNTNAN

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCACGATT--
AGTATTCTCGGTTGC

MA0069.1_Pax6/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCACGATT-----
TTCACGCATGAGTT

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCACGATT---
TTGCCCGGATTAGG

MA0067.1_Pax2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCACGATT
AGTCACGC--

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCACGATT--
NNCNNAACAATTNT

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCACGATT---
GAATGACGAATAAC

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCACGATT--
ACCACTCTCGGTCAC

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCACGATT-----
NNANTAACGGTTNNNAN