Information for motif35


Reverse Opposite:

p-value:1e-16
log p-value:-3.797e+01
Information Content per bp:1.783
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets427.9 +/- 282.3bp
Average Position of motif in Background440.0 +/- 395.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CAATCCKCAA-
SSAATCCACANN

MA0479.1_FOXH1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CAATCCKCAA
TCCAATCCACA-

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CAATCCKCAA--
AGGCTAATCCCCAANG

MA0060.2_NFYA/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CAATCCKCAA---
TGGACCAATCAGCACTCT

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CAATCCKCAA
GAAGATCAATCACTAA

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CAATCCKCAA
GAAGATCAATCACTTA

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAATCCKCAA--
CGACCCAATCAACGGTG

MA0502.1_NFYB/Jaspar

Match Rank:8
Score:0.62
Offset:-8
Orientation:forward strand
Alignment:--------CAATCCKCAA
AAATGGACCAATCAG---

MA0038.1_Gfi1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAATCCKCAA
CAAATCACTG-

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAATCCKCAA
AGCCAATCGG---