Information for motif36


Reverse Opposite:

p-value:1e-16
log p-value:-3.797e+01
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets411.9 +/- 332.2bp
Average Position of motif in Background278.2 +/- 120.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGCAGTGCTA-----
CGAACAGTGCTCACTAT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAGTGCTA--
NNNANTGCAGTGCNNTT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCAGTGCTA-
-GCAGTGATTT

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAGTGCTA-
NNNNTGCCAGTGATTG

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCAGTGCTA-
TGCTGTGATTT

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCAGTGCTA
CAGCC------

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCAGTGCTA--------
--CNNNGCTACTGTANNN

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGCAGTGCTA
TTAAGTGCTT

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AGCAGTGCTA
GCCGCGCAGTGCGT

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGTGCTA
CTYRAGTGSY-