Information for motif37


Reverse Opposite:

p-value:1e-16
log p-value:-3.785e+01
Information Content per bp:1.530
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets481.7 +/- 420.9bp
Average Position of motif in Background803.2 +/- 471.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACGAAATCACCA--
AAGGCGAAATCATCGCA

MA0038.1_Gfi1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACGAAATCACCA
--CAAATCACTG

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACGAAATCACCA---
CGACCCAATCAACGGTG

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACGAAATCACCA
NACAGGAAAT-----

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACGAAATCACCA
-GGAAATTCCC-

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACGAAATCACCA
-GGAAATCCCC-

MA0468.1_DUX4/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACGAAATCACCA
TAATTTAATCA---

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACGAAATCACCA
ATGACGTCATCN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACGAAATCACCA
ACTGAAACCA---

MA0496.1_MAFK/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACGAAATCACCA----
-CTGAGTCAGCAATTT