Information for motif39


Reverse Opposite:

p-value:1e-13
log p-value:-3.189e+01
Information Content per bp:1.598
Number of Target Sequences with motif4723.0
Percentage of Target Sequences with motif20.39%
Number of Background Sequences with motif1756.9
Percentage of Background Sequences with motif18.43%
Average Position of motif in Targets417.7 +/- 336.8bp
Average Position of motif in Background451.9 +/- 357.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----ACGGTAGC----
ATTTACAGTAGCAAAA

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----ACGGTAGC----
ATGTACAGTAGCAAAG

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ACGGTAGC---
NNNNTAACGGTTNNNAN

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ACGGTAGC---
NNANTAACGGTTNNNAN

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ACGGTAGC----
NNNTTAGGTAGCNTNT

MA0111.1_Spz1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACGGTAGC---
AGGGTAACAGC

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACGGTAGC
GGTAAGTA--

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ACGGTAGC----
NNTGTAGGTAGCANNT

PB0127.1_Gata6_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACGGTAGC------
GCGGCGATATCGCAGCG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACGGTAGC
ANCCGGAAGT