Information for motif4


Reverse Opposite:

p-value:1e-40
log p-value:-9.305e+01
Information Content per bp:1.889
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets384.1 +/- 287.9bp
Average Position of motif in Background584.8 +/- 370.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0014.1_Cphx/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:STGATCCCAT----
ATGATCGAATCAAA

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---STGATCCCAT----
NNNTCCATCCCATAANN

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----STGATCCCAT---
TGTCGTGACCCCTTAAT

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--STGATCCCAT--------
NDBAGATRWTATCTVNNNNN

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---STGATCCCAT---
NNNNTGACCCGGCGCG

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----STGATCCCAT---
NNNATTAATCCGNTTNA

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-STGATCCCAT
GCTAATCC---

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--STGATCCCAT
CNGTCCTCCC--

MA0467.1_Crx/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:STGATCCCAT-
CTAATCCTCTT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:STGATCCCAT
MTGATGCAAT