Information for motif43


Reverse Opposite:

p-value:1e-12
log p-value:-2.969e+01
Information Content per bp:1.926
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets451.5 +/- 256.7bp
Average Position of motif in Background732.9 +/- 372.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0131.1_HINFP/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGACGTTC
GCGGACGTTN

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.66
Offset:-8
Orientation:reverse strand
Alignment:--------CGACGTTC
NNTTTANNCGACGNA-

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGACGTTC
TGACGT--

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGACGTTC-
-TACGTGCV

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CGACGTTC---
TTTTACGACTTTCCAT

PB0131.1_Gmeb1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGACGTTC----
TNAACGACGTCGNCCA

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGACGTTC
GGACGTGC

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGACGTTC
GGGTACGTGC

PB0094.1_Zfp128_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGACGTTC-----
TCTTTGGCGTACCCTAA

MA0059.1_MYC::MAX/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGACGTTC--
ACCACGTGCTC