Information for motif44


Reverse Opposite:

p-value:1e-12
log p-value:-2.882e+01
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets446.0 +/- 258.5bp
Average Position of motif in Background727.9 +/- 322.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TACATGCCTT
NNACTTGCCTT

MA0090.1_TEAD1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TACATGCCTT--
CACATTCCTCCG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TACATGCCTT-
-RCATTCCWGG

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TACATGCCTT
TACGTGCV--

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGCCTT--
ANTNTTACATGTATNTA

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TACATGCCTT
TACTNNNN--

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TACATGCCTT----
NNNTCCATCCCATAANN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TACATGCCTT-
-GCATTCCAGN

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TACATGCCTT---
AATATACATGTAATATA

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TACATGCCTT
GGGTACGTGC---