Information for motif46


Reverse Opposite:

p-value:1e-12
log p-value:-2.829e+01
Information Content per bp:1.726
Number of Target Sequences with motif192.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif45.6
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets416.4 +/- 331.5bp
Average Position of motif in Background444.4 +/- 304.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TACGGGAC---
NNNNATGCGGGTNNNN

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TACGGGAC---
TGCGCATAGGGGAGGAG

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TACGGGAC
HACTTCCGGY-

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TACGGGAC
NRYTTCCGGY-

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TACGGGAC
TACTNNNN

MA0062.2_GABPA/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TACGGGAC
NCCACTTCCGG--

MA0028.1_ELK1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TACGGGAC
CTTCCGGNNN

MA0597.1_THAP1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TACGGGAC-
TNNGGGCAG

MA0076.2_ELK4/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TACGGGAC
CCACTTCCGGC-

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TACGGGAC
ACATCCTGNT-