Information for motif47


Reverse Opposite:

p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.530
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets486.7 +/- 360.8bp
Average Position of motif in Background249.7 +/- 94.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0133.1_BRCA1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAACTCGC
ACAACAC--

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAACTCGC----
CGACCAACTGCCATGC

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAACTCGC---
CGACCAACTGCCGTG

MA0100.2_Myb/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAACTCGC-
CCAACTGCCA

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAACTCGC-
CCAACTGCCA

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAACTCGC------
ACCACTCTCGGTCAC

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CAACTCGC-
---CACGCA

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAACTCGC
ACTACAATTCCC

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAACTCGC---
NNACTTGCCTT

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAACTCGC------
TCGTACCCGCATCATT