Information for motif48


Reverse Opposite:

p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.530
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets366.2 +/- 290.8bp
Average Position of motif in Background626.7 +/- 430.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GACGGTTC
TGTCGGTT-

PB0045.1_Myb_1/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGTTC----
NNNNTAACGGTTNNNAN

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGTTC----
NNANTAACGGTTNNNAN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GACGGTTC
GGCVGTTR

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACGGTTC-
BRRCVGTTDN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GACGGTTC-
TGGCAGTTGG

MA0100.2_Myb/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GACGGTTC-
TGGCAGTTGN

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GACGGTTC----
NNNTGGCAGTTGGTNN

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGTTC-------
TTCTAGAANNTTCCAGAANN

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGTTC---
GGATTGACAGGTCNTT