Information for motif7


Reverse Opposite:

p-value:1e-38
log p-value:-8.966e+01
Information Content per bp:1.956
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets394.2 +/- 311.6bp
Average Position of motif in Background238.9 +/- 181.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACAGTCTTGG
-CTGTCTGG-

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTCTTGG
CACAGN-----

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACAGTCTTGG
---GTGTTGN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACAGTCTTGG
VBSYGTCTGG-

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ACAGTCTTGG--
------TTGGCA

POL002.1_INR/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACAGTCTTGG
TCAGTCTT--

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACAGTCTTGG-
CACATTCCTCCG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACAGTCTTGG
-TWGTCTGV-

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACAGTCTTGG----
NNTNNTGTCTGGNNTNG

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ACAGTCTTGG
---GTCATN-