Information for motif8


Reverse Opposite:

p-value:1e-38
log p-value:-8.863e+01
Information Content per bp:1.848
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets433.4 +/- 412.1bp
Average Position of motif in Background604.1 +/- 431.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTTCAATACG------
CATACAATACGAAATAA

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTTCAATACG----
ATGGTTCAATAATTTTG

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTCAATACG
DGATCRATAN-

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTTCAATACG
AGATGCAATCCC

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTTCAATACG-
AATCAATTCAATAATT

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GTTCAATACG--
NNNNNGAACAATTGANN

CHR/Cell-Cycle-Exp/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTTCAATACG
CGGTTTCAAA---

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GTTCAATACG--
CTAAGGTTCTAGATCAC

MA0095.2_YY1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTTCAATACG-----
---CAAGATGGCGGC

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GTTCAATACG
GGCAAAAGTCCAATAA-