Information for motif38


Reverse Opposite:

p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.609
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif15.71%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif5.00%
Average Position of motif in Targets400.2 +/- 331.2bp
Average Position of motif in Background584.3 +/- 269.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTACACCATTT
ATTGCATCAT--

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTACACCATTT
-TTGCAACATN-

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTACACCATTT
ATTGCATCAK--

MA0466.1_CEBPB/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTACACCATTT
TATTGCACAAT--

MA0488.1_JUN/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTACACCATTT-
ATGACATCATCNN

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTACACCATTT-
NNTTTTCACACCTTNNN

MA0043.1_HLF/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTACACCATTT
GGTTACGCAATA-

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTTACACCATTT
ATTAACACCT---

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTTACACCATTT-
TCNCTTTACAGCGNNNT

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTTACACCATTT-
NNCNNAACAATTNT