Information for motif25


Reverse Opposite:

p-value:1e-13
log p-value:-3.019e+01
Information Content per bp:1.807
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif13.11%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif3.68%
Average Position of motif in Targets312.6 +/- 330.8bp
Average Position of motif in Background221.0 +/- 254.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--THTTTTWTWTTK
NNTTTTTCTTATNT

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-THTTTTWTWTTK--
NTNTTGTTGTTTGTN

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-THTTTTWTWTTK----
GNATTTTTTTTTTGANC

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-THTTTTWTWTTK----
NNNNTTTTTTTTTNAAC

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:THTTTTWTWTTK----
-NNTTTNTTTTNGNNN

MA0041.1_Foxd3/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-THTTTTWTWTTK
GAATGTTTGTTT-

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:THTTTTWTWTTK--
TTTTTTTTCNNGTN

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-THTTTTWTWTTK----
NTNAATTTTATTGNATT

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:THTTTTWTWTTK----
NNAATTTTATTGGNTN

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:THTTTTWTWTTK----
NNANTTTTATTGGNNN