Information for motif29


Reverse Opposite:

p-value:1e-11
log p-value:-2.753e+01
Information Content per bp:1.757
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif7.01%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets421.3 +/- 334.3bp
Average Position of motif in Background567.3 +/- 215.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----ATAGAACC--
TATCATTAGAACGCT

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----ATAGAACC----
NNGATCTAGAACCTNNN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ATAGAACC
CCAAAAATAG----

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ATAGAACC
TATACATA-----

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATAGAACC---
CCGCATAGCAACGGA

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATAGAACC------
TTCNAAGTACTTNNNNN

PB0096.1_Zfp187_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATAGAACC---
TTATTAGTACATAN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATAGAACC-
CCAGGAACAG

MA0497.1_MEF2C/Jaspar

Match Rank:9
Score:0.56
Offset:-9
Orientation:forward strand
Alignment:---------ATAGAACC
ATGCTAAAAATAGAA--

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATAGAACC---
TACCATAGCAACGGT