Information for motif3


Reverse Opposite:

p-value:1e-29
log p-value:-6.691e+01
Information Content per bp:1.618
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif8.54%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets387.5 +/- 265.8bp
Average Position of motif in Background510.9 +/- 105.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAAGGCTCTGC------
-AATCGCACTGCATTCCG

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAAGGCTCTGC---
AGATGCTRCTRCCHT

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AGAAGGCTCTGC-
-------GCTGTG

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGAAGGCTCTGC
NGAAGC------

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AGAAGGCTCTGC--
GCCASCAGGGGGCGCYVNNG

MA0461.1_Atoh1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAAGGCTCTGC
CAGATGGC-----

POL002.1_INR/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAAGGCTCTGC
----NNNANTGA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------AGAAGGCTCTGC
TGGCCACCAGGTGGCACTNT

MA0139.1_CTCF/Jaspar

Match Rank:9
Score:0.51
Offset:-8
Orientation:forward strand
Alignment:--------AGAAGGCTCTGC
TGGCCACCAGGGGGCGCTA-

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGAAGGCTCTGC--
VAGRACAKNCTGTBC