Information for motif4


Reverse Opposite:

p-value:1e-26
log p-value:-6.139e+01
Information Content per bp:1.719
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif12.80%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets309.8 +/- 280.2bp
Average Position of motif in Background467.2 +/- 364.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.85
Offset:-8
Orientation:forward strand
Alignment:--------CCCCCTGGTGGB
CNNBRGCGCCCCCTGSTGGC

MA0139.1_CTCF/Jaspar

Match Rank:2
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCCTGGTGGB--
TAGCGCCCCCTGGTGGCCA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.81
Offset:-6
Orientation:forward strand
Alignment:------CCCCCTGGTGGB--
ANAGTGCCACCTGGTGGCCA

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCCCCTGGTGGB
CCCCCTGCTGTG

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGGTGGB-
CCCCCCCGGGGGGGT

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGGTGGB
CACCCCCGGGGGGG

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGGTGGB-
CCCCCCCGGGGGGGT

MA0154.2_EBF1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCCCCTGGTGGB
-TCCCTGGGGAN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCCCTGGTGGB
TCCCCTGGGGAC

MA0057.1_MZF1_5-13/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCTGGTGGB
TTCCCCCTAC----