Information for motif20


Reverse Opposite:

p-value:1e-14
log p-value:-3.231e+01
Information Content per bp:1.443
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif12.21%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif1.74%
Average Position of motif in Targets351.9 +/- 381.2bp
Average Position of motif in Background485.9 +/- 280.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TCCCCATCCAAG--
ANNTNCCCACCCANNAC

PB0107.1_Ascl2_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCCCCATCCAAG-
CTATCCCCGCCCTATT

MA0057.1_MZF1_5-13/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCATCCAAG
TTCCCCCTAC---

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCATCCAAG----
NNNTCCATCCCATAANN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCCCCATCCAAG
TCCCCA------

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCCCATCCAAG
-CCCCCCCC---

MA0599.1_KLF5/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCCCATCCAAG
GCCCCGCCCC--

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCCCCATCCAAG---
GATAACATCCTAGTAG

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCCCCATCCAAG----
GACCACATTCATACAAT

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCCCCATCCAAG
GCCCCACCCA--