Information for motif1


Reverse Opposite:

p-value:1e-72
log p-value:-1.662e+02
Information Content per bp:1.691
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif26.89%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif2.12%
Average Position of motif in Targets420.6 +/- 419.5bp
Average Position of motif in Background627.4 +/- 563.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-KGRGCCTCAG----
CATGGCCCCAGGGCA

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:KGRGCCTCAG-----
---GCCTCAGGGCAT

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:KGRGCCTCAG-
-----CACAGN

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:KGRGCCTCAG-----
---SCCTSAGGSCAW

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KGRGCCTCAG----
CATTGCCTCAGGGCA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KGRGCCTCAG-----
NTNGCCTCAGGCNNN

MA0111.1_Spz1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KGRGCCTCAG-
AGGGTAACAGC

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KGRGCCTCAG-----
ATTGCCTCAGGCAAT

POL002.1_INR/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:KGRGCCTCAG----
------TCAGTCTT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:KGRGCCTCAG-----
NTCGCCTCAGGCAAT