Information for motif13


Reverse Opposite:

p-value:1e-26
log p-value:-6.046e+01
Information Content per bp:1.693
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif36.72%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif12.98%
Average Position of motif in Targets428.6 +/- 391.7bp
Average Position of motif in Background579.2 +/- 482.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGGSTGCA-----
GGCGAGGGGTCAAGGGC

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGGSTGCA-----
NTNNNGGGGTCANGNNN

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGGSTGCA-----
CTCCAGGGGTCAATTGA

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGGSTGCA---
NTNTGGGGGGTCNNNA

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGGSTGCA-----
NNNAAGGGGGCGGGNNN

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGGSTGCA----
NGTAGGTTGGCATNNN

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGGSTGCA
--GCTTCC

POL002.1_INR/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGGSTGCA-----
-----TCAGTCTT

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGGSTGCA----
GGGCCGTGTGCAAAAA

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGGSTGCA----
GCTGGGGGGTACCCCTT