Information for motif21


Reverse Opposite:

p-value:1e-20
log p-value:-4.652e+01
Information Content per bp:1.648
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif26.23%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif8.52%
Average Position of motif in Targets429.3 +/- 374.1bp
Average Position of motif in Background655.5 +/- 397.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TCSTGGCC-
-CTAGGCCT

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TCSTGGCC
--TTGGCA

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCSTGGCC-
-CNAGGCCT

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCSTGGCC--
GGGGCCGAGGCCTG

MA0160.1_NR4A2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCSTGGCC--
--GTGACCTT

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCSTGGCC---
TGATTGGCTANN

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCSTGGCC-
---TGACCT

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCSTGGCC-
-CTTGGCAA

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCSTGGCC-----
NNANTGGTGGTCTTNNN

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCSTGGCC----
--CTGACCTTTG