Information for motif8


Reverse Opposite:

p-value:1e-32
log p-value:-7.574e+01
Information Content per bp:1.611
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif24.26%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif4.78%
Average Position of motif in Targets459.7 +/- 449.6bp
Average Position of motif in Background793.2 +/- 518.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TVGCCGSC
NRYTTCCGGY

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TVGCCGSC------
--GCCGCCATCTTG

MA0028.1_ELK1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TVGCCGSC--
CTTCCGGNNN

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TVGCCGSC------
CCTTCGGCGCCAAAAGG

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TVGCCGSC------
TACGCCCCGCCACTCTG

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TVGCCGSC------
AGCTCGGCGCCAAAAGC

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TVGCCGSC
HACTTCCGGY

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TVGCCGSC
NRYTTCCGGH

MA0117.1_Mafb/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TVGCCGSC--
--GCTGACGC

MA0024.2_E2F1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TVGCCGSC--
CCTCCCGCCCN