Information for motif23


Reverse Opposite:

p-value:1e-25
log p-value:-5.925e+01
Information Content per bp:1.448
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets324.2 +/- 250.3bp
Average Position of motif in Background625.2 +/- 284.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CASCATGAGATA--
AAACATAATGAGGTTGC

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CASCATGAGATA
---CATGAC---

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CASCATGAGATA
CCACACAGCAGGAGA--

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CASCATGAGATA
CCACACAGCAGGAGA--

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CASCATGAGATA
GAGCACAGCAGGACA--

MA0078.1_Sox17/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CASCATGAGATA
GACAATGNN---

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CASCATGAGATA--
GACGATAATGAGCTTGC

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CASCATGAGATA
-NACAGGAAAT-

MA0132.1_Pdx1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CASCATGAGATA
---AATTAG---

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CASCATGAGATA-
NNTNNACAATGGGANNN