Information for motif12


Reverse Opposite:

p-value:1e-41
log p-value:-9.540e+01
Information Content per bp:1.530
Number of Target Sequences with motif183.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets549.5 +/- 487.1bp
Average Position of motif in Background970.5 +/- 396.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGAGGTTGACGA-----
---GAATGACGAATAAC

PH0067.1_Hoxc12/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAGGTTGACGA-----
GNNNTTTTACGACCTNA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGAGGTTGACGA
------TGACGT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGGTTGACGA
GGCVGTTR----

PH0065.1_Hoxc10/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGAGGTTGACGA-----
-ANNTTTTACGACNTNN

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAGGTTGACGA-----
ANNATTTTACGACNTNA

PH0047.1_Hoxa11/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGAGGTTGACGA-----
-NNGTTTTACGACTTTA

MA0131.1_HINFP/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGTTGACGA
GCGGACGTTN----

MA0117.1_Mafb/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGAGGTTGACGA
----GCTGACGC

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGGTTGACGA-----
NNNATTTTACGACNNTN