Information for motif4


Reverse Opposite:

p-value:1e-62
log p-value:-1.446e+02
Information Content per bp:1.977
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets401.0 +/- 369.4bp
Average Position of motif in Background408.5 +/- 194.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ACCAGTAATA-
NNNNTGCCAGTGATTG

MA0158.1_HOXA5/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACCAGTAATA
--CACTAATT

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACCAGTAATA----
AACCCAATAAAATTCG

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACCAGTAATA--
DCYAAAAATAGM

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACCAGTAATA-
-CCAAAAATAG

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ACCAGTAATA--
AAAATACATGTAATACT

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACCAGTAATA----
CTACCAATAAAATTCT

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACCAGTAATA
---AATAATT

PH0080.1_Hoxd8/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACCAGTAATA-----
NAGCCATTAATTANTTA

PH0062.1_Hoxb7/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACCAGTAATA-----
TNNCATTAATTANTNC