| p-value: | 1e-13 |
| log p-value: | -3.021e+01 |
| Information Content per bp: | 1.613 |
| Number of Target Sequences with motif | 22.0 |
| Percentage of Target Sequences with motif | 21.36% |
| Number of Background Sequences with motif | 2.6 |
| Percentage of Background Sequences with motif | 3.48% |
| Average Position of motif in Targets | 106.0 +/- 63.2bp |
| Average Position of motif in Background | 121.4 +/- 42.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.8 |
| Multiplicity (# of sites on avg that occur together) | 1.25 |
| Motif File: | file (matrix) reverse opposite |
| PDF Format Logos: | forward logo reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATCCATCC- GYCATCMATCAT |
|

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HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATCCATCC NTATYGATCH |
|

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MA0070.1_PBX1/Jaspar
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATCCATCC-- CCATCAATCAAA |
|

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|
PB0098.1_Zfp410_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATCCATCC------- NNNTCCATCCCATAANN |
|

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|
PB0144.1_Lef1_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATCCATCC---- GAAGATCAATCACTTA |
|

|
|
PB0188.1_Tcf7l2_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATCCATCC---- GAAGATCAATCACTAA |
|

|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATCCATCC TCATCAATCA |
|

|
|
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATCCATCC RGCCATYAATCA |
|

|
|
PH0134.1_Pbx1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATCCATCC------- TCACCCATCAATAAACA |
|

|
|
PB0028.1_Hbp1_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATCCATCC----- NNCATTCATTCATNNN |
|

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