Information for motif17


Reverse Opposite:

p-value:1e-9
log p-value:-2.154e+01
Information Content per bp:1.863
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif27.91%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif4.18%
Average Position of motif in Targets150.2 +/- 67.3bp
Average Position of motif in Background103.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0442.1_SOX10/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TACAWAGA
-ACAAAG-

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TACAWAGA----
AGAAGAACAAAGGACTA

MA0033.1_FOXL1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TACAWAGA
TATACATA--

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TACAWAGA----
ATAAGAACAAAGGACTA

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TACAWAGA---
AAACAGACAAAGGAAT

MA0042.1_FOXI1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TACAWAGA---
AAACAAACANNC

MA0514.1_Sox3/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TACAWAGA
AAAACAAAGG

MA0025.1_NFIL3/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TACAWAGA
ANGTTACATAA-

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TACAWAGA---
CAATTGCAAAAATAT

Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TACAWAGA----
ATTTGCATACAATGG