Information for motif16


Reverse Opposite:

p-value:1e-9
log p-value:-2.293e+01
Information Content per bp:1.577
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif37.21%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif6.07%
Average Position of motif in Targets125.1 +/- 88.2bp
Average Position of motif in Background60.0 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CGTGTAGTGG----
NNNANTGCAGTGCNNTT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGTGTAGTGG--
--TTGAGTGSTT

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGTGTAGTGG-
-CTYRAGTGSY

MA0122.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGTGTAGTGG-
--TTAAGTGGA

MA0057.1_MZF1_5-13/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGTGTAGTGG---
---GGAGGGGGAA

MA0130.1_ZNF354C/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CGTGTAGTGG--
------GTGGAT

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTAGTGG----
AATTTCAAGTGGCTTN

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTAGTGG----
AANTTCAAGTGGCTTN

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGTGTAGTGG-----
TGCGCATAGGGGAGGAG

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGTGTAGTGG------
TGCGGAGTGGGACTGG