Information for motif4


Reverse Opposite:

p-value:1e-14
log p-value:-3.348e+01
Information Content per bp:1.687
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif53.49%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif8.68%
Average Position of motif in Targets111.6 +/- 66.6bp
Average Position of motif in Background269.7 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-KGTCCTGT-
ATTTCCTGTN

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-KGTCCTGT-
ACTTCCTGTT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-KGTCCTGT-
ATTTCCTGTN

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--KGTCCTGT
CACTTCCTGT

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:KGTCCTGT-
---GCTGTG

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:KGTCCTGT
-TTCCTCT

MA0098.2_Ets1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----KGTCCTGT---
CCCACTTCCTGTCTC

MA0474.1_Erg/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---KGTCCTGT
CCACTTCCTGT

MA0475.1_FLI1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---KGTCCTGT
CCACTTCCTGT

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KGTCCTGT
CTTCCGGT