Information for motif18


Reverse Opposite:

p-value:1e-9
log p-value:-2.154e+01
Information Content per bp:1.611
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif27.91%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets112.1 +/- 86.4bp
Average Position of motif in Background159.7 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0201.1_Zfp281_2/Jaspar

Match Rank:1
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----GCCCCCAT----
AGGAGACCCCCAATTTG

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GCCCCCAT----
TCGTACCCGCATCATT

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------GCCCCCAT---
GGTCCCGCCCCCTTCTC

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCCCCCAT
CTGCCCGCA-

MA0155.1_INSM1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCAT---
CGCCCCCTGACA

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCCCCCAT-----
AAGCCCCCCAAAAAT

PB0100.1_Zfp740_1/Jaspar

Match Rank:7
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GCCCCCAT---
CCCCCCCCCCCACTTG

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCCCCCAT-----
NTCNTCCCCTATNNGNN

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCCCCCAT----
GCCGCCATCTTG

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCCCCAT---
TCCGCCCCCGCATT