Information for motif25


Reverse Opposite:

p-value:1e-6
log p-value:-1.495e+01
Information Content per bp:1.627
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif39.53%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif11.97%
Average Position of motif in Targets141.9 +/- 78.5bp
Average Position of motif in Background131.1 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TCAAGAAATT--
ATGGTTCAATAATTTTG

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCAAGAAATT----
TTCTAGAABNTTCTA

MA0486.1_HSF1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCAAGAAATT---
CTTCTAGAAGGTTCT

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCAAGAAATT---
NNGATCTAGAACCTNNN

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAAGAAATT---
CTACCAATAAAATTCT

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCAAGAAATT-----
GTTCAAAAAAAAAATTC

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCAAGAAATT
NACAGGAAAT-

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCAAGAAATT--
TCTTTCGAGGAATTTG

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCAAGAAATT--
AAAGTAAACAAAAATT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCAAGAAATT
TACTGGAAAAAAAA