Information for motif29


Reverse Opposite:

p-value:1e-6
log p-value:-1.382e+01
Information Content per bp:1.398
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif20.93%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif3.67%
Average Position of motif in Targets140.2 +/- 103.0bp
Average Position of motif in Background209.9 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---VAAACCTN
ACTGAAACCA-

MA0009.1_T/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--VAAACCTN-
TTCACACCTAG

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----VAAACCTN---
NNGGCGACACCTCNNN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-VAAACCTN
TGACACCT-

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------VAAACCTN-
CGTATCGAAACCAAA

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------VAAACCTN
ATAAACCGAAACCAA

MA0164.1_Nr2e3/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:VAAACCTN
-CAAGCTT

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------VAAACCTN---
CTGATCGAAACCAAAGT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:VAAACCTN---
-AAACCACANN

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---VAAACCTN
KTTCACACCT-