Information for motif9


Reverse Opposite:

p-value:1e-13
log p-value:-3.025e+01
Information Content per bp:1.761
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif34.88%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif3.04%
Average Position of motif in Targets165.7 +/- 79.4bp
Average Position of motif in Background143.6 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CAGCRAAG
CACAGN----

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAGCRAAG
CAGCC---

MA0117.1_Mafb/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CAGCRAAG
NCGTCAGC----

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCRAAG
TGAGTCAGCA---

MA0496.1_MAFK/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CAGCRAAG-
CTGAGTCAGCAATTT

MA0014.2_PAX5/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAGCRAAG------
GAGGGCAGCCAAGCGTGAC

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CAGCRAAG--
NCTANGTCAGCAAATTT

MA0495.1_MAFF/Jaspar

Match Rank:8
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CAGCRAAG---
GCTGAGTCAGCAATTTTT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAGCRAAG--
HWWGTCAGCAWWTTT

PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGCRAAG-------
GCAGCCAAGCGTGACN