Information for motif7


Reverse Opposite:

p-value:1e-13
log p-value:-3.086e+01
Information Content per bp:1.705
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif51.16%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif9.71%
Average Position of motif in Targets166.9 +/- 83.7bp
Average Position of motif in Background103.5 +/- 75.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GGRTCAAAGW----
NANAGATCAAAGGGNNN

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GGRTCAAAGW----
NNNAGATCAAAGGANNN

MA0484.1_HNF4G/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GGRTCAAAGW---
AGAGTCCAAAGTCCA

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGRTCAAAGW----
TATAGATCAAAGGAAAA

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGRTCAAAGW--
ACATCAAAGGNA

MA0114.2_HNF4A/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGRTCAAAGW----
NAGNNCAAAGTCCAN

MA0514.1_Sox3/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGRTCAAAGW
AAAACAAAGG

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGRTCAAAGW---
CANAGNNCAAAGTCCA

MA0523.1_TCF7L2/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGRTCAAAGW--
AAAGATCAAAGGAA

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGRTCAAAGW----
TATAGATCAAAGGAAAA