Information for motif28


Reverse Opposite:

p-value:1e-6
log p-value:-1.382e+01
Information Content per bp:1.659
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif20.93%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif3.43%
Average Position of motif in Targets134.8 +/- 92.9bp
Average Position of motif in Background90.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-ATDWAAAAAAAA----
GTTAAAAAAAAAAATTA

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--ATDWAAAAAAAA
TACTGGAAAAAAAA

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ATDWAAAAAAAA----
GTTCAAAAAAAAAATTC

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATDWAAAAAAAA
AAATAAGAAAAAAC

MA0481.1_FOXP1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATDWAAAAAAAA-
CAAAAGTAAACAAAG

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ATDWAAAAAAAA----
-AACAAACAACAAGAG

PB0019.1_Foxl1_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATDWAAAAAAAA---
TAAATGTAAACAAAGGT

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATDWAAAAAAAA---
AAAAAGTAAACAAACAC

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATDWAAAAAAAA----
AAAGTAAACAAAAATT

MA0041.1_Foxd3/Jaspar

Match Rank:10
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ATDWAAAAAAAA-----
-----AAACAAACATTC