Information for motif19


Reverse Opposite:

p-value:1e-22
log p-value:-5.245e+01
Information Content per bp:1.714
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif12.63%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets147.3 +/- 81.0bp
Average Position of motif in Background173.9 +/- 45.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0398.1_SUM1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TCTATATTTT-
--AAAATTTTT

bin/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TCTATATTTT-
----TATTTAC

YOX1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TCTATATTTT
CGTCANTATTCT

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TCTATATTTT----
--KCTATTTTTRGH

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TCTATATTTT---
---CTATTTTTGG

Unknown4/Drosophila-Promoters/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCTATATTTT-
TKYGGTATTTTT

pan/dmmpmm(Down)/fly

Match Rank:7
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TCTATATTTT-
----TGTTTTT

slp1/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCTATATTTT--
--AATATTTACA

MA0379.1_SIG1/Jaspar

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCTATATTTT
--TATAT---

MA0033.1_FOXL1/Jaspar

Match Rank:10
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TCTATATTTT--
----TATGTNTA