Information for motif24


Reverse Opposite:

p-value:1e-25
log p-value:-5.763e+01
Information Content per bp:1.928
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif8.27%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets142.9 +/- 85.3bp
Average Position of motif in Background121.1 +/- 41.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br-Z4/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTCTTTCG
-TCTTTAC

Trl/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTCTTTCG
TTGCTCTCTC-

MA0205.1_Trl/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTCTTTCG
TTGCTCTCTC-

SWI4(MacIsaac)/Yeast

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTCTTTCG---
--TTTTCGCGT

MA0053.1_MNB1A/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCTTTCG
-GCTTT--

Kr/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCTTTCG
TAACCCTTTNG

MA0021.1_Dof3/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTCTTTCG
CGCTTT--

MA0062.2_GABPA/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTTCG-
NCCACTTCCGG

SeqBias: GA-repeat

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTCTTTCG
TCTCTCTCTC-

MA0064.1_PBF/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCTTTCG
-GCTTT--