Information for motif8


Reverse Opposite:

p-value:1e-31
log p-value:-7.197e+01
Information Content per bp:1.587
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets134.4 +/- 92.6bp
Average Position of motif in Background43.1 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--GTGACGTCACAC
CGGTGACGTCAC--

PB0004.1_Atf1_1/Jaspar

Match Rank:2
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---GTGACGTCACAC-
NCGATGACGTCATCGN

MA0018.2_CREB1/Jaspar

Match Rank:3
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GTGACGTCACAC
-TGACGTCA---

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:4
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GTGACGTCACAC
NGATGACGTCAT--

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTGACGTCACAC
-TGACGTCATC-

PB0038.1_Jundm2_1/Jaspar

Match Rank:6
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---GTGACGTCACAC-
NCGATGACGTCATCGN

STF1(bZIP)/Glycine max/AthaMap

Match Rank:7
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTGACGTCACAC
NATGACGTCATC-

MA0286.1_CST6/Jaspar

Match Rank:8
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GTGACGTCACAC
-TTACGTCAT--

MA0588.1_TGA1/Jaspar

Match Rank:9
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GTGACGTCACAC
-TNACGTCANCA

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GTGACGTCACAC
NGATGACGTCAT--