Information for motif22


Reverse Opposite:

p-value:1e-19
log p-value:-4.387e+01
Information Content per bp:1.811
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif9.91%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets130.1 +/- 66.0bp
Average Position of motif in Background99.1 +/- 75.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pho/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TGCCATAG
-GCCATT-

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGCCATAG
TGCCAA--

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGCCATAG
TTGCCAAG-

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCCATAG-
AGATGCAATCCC

MET32(MacIsaac)/Yeast

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGCCATAG---
-GCCACAGTTT

Abd-B/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGCCATAG----
NNNGCCATAAANGN

Achi/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGCCATAG
GCTGTCAAAN

MA0288.1_CUP9/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCCATAG-
TGACACATT

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCCATAG-
ATGCCAGACN

pho/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGCCATAG----
GAAGCCATAACGGC