Information for motif34


Reverse Opposite:

p-value:1e-13
log p-value:-3.034e+01
Information Content per bp:1.779
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif9.91%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets164.7 +/- 74.5bp
Average Position of motif in Background207.2 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0367.1_RGT1/Jaspar

Match Rank:1
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--TTATTCCG-
AATTTTTCCGG

MA0294.1_EDS1/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TTATTCCG
ATTTTTCCG

RGT1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:TTATTCCG
-TNNTCCG

MA0325.1_LYS14/Jaspar

Match Rank:4
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TTATTCCG-
-AATTCCGG

MA0311.1_HAL9/Jaspar

Match Rank:5
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:TTATTCCG
---TTCCG

RGT1(MacIsaac)/Yeast

Match Rank:6
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTATTCCG--
TTTTTCCGGC

MA0420.1_YBR239C/Jaspar

Match Rank:7
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TTATTCCG--
--GTTCCGGT

Oc/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TTATTCCG
NNTTAATCCN

PH0126.1_Obox6/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTATTCCG-----
CNATAATCCGNTTNT

MA0201.1_Ptx1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TTATTCCG
TTAATCC-