Information for motif27


Reverse Opposite:

p-value:1e-18
log p-value:-4.289e+01
Information Content per bp:1.678
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif9.13%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets139.1 +/- 86.4bp
Average Position of motif in Background122.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Adf1/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:VCKCGAGMGCGA
---CGACCGCG-

SeqBias: CG-repeat

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:VCKCGAGMGCGA
-CGCGCGCGCG-

MA0414.1_XBP1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:VCKCGAGMGCGA
-CTCGAGA----

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--VCKCGAGMGCGA---
NGCTGCGATATCGNCGC

MA0051.1_IRF2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:VCKCGAGMGCGA---------
---GGAAAGCGAAACCAAAAC

MA0401.1_SWI4/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:VCKCGAGMGCGA--
------ACGCGAAA

SeqBias: GA-repeat

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:VCKCGAGMGCGA--
----GAGAGAGAGA

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:VCKCGAGMGCGA--
----AAACGCGAAA

Trl/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:VCKCGAGMGCGA
--GAGAGAGCAA

MA0205.1_Trl/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:VCKCGAGMGCGA
--GAGAGAGCAA