Information for motif40


Reverse Opposite:

p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.790
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets93.9 +/- 82.4bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TACTCTYG
TACTNNNN

RAV1(1)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TACTCTYG---
NTTCTGTTGCNN

MA0582.1_RAV1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TACTCTYG---
NTTCTGTTGCNN

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TACTCTYG
ACTTCCTGTT-

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TACTCTYG-----
ACCACTCTCGGTCAC

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TACTCTYG--
TNNTGCTACTGTNNNN

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TACTCTYG-----
NNAATTCTCGNTNAN

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TACTCTYG-----
AGTATTCTCGGTTGC

MA0454.1_odd/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TACTCTYG
CTGCTACTGTT-

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TACTCTYG--
CNNNGCTACTGTANNN