Information for motif26


Reverse Opposite:

p-value:1e-17
log p-value:-3.993e+01
Information Content per bp:1.678
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif11.79%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.54%
Average Position of motif in Targets167.4 +/- 81.4bp
Average Position of motif in Background35.7 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0553.1_SMZ/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TGTTCTCGTCCT
---CCTCGTAC-

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTTCTCGTCCT---
GAGCCCTTGTCCCTAA

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTTCTCGTCCT
TGACCTTGACCT

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTTCTCGTCCT
NNNTGTTGTTGTTNG

Deaf1/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGTTCTCGTCCT
----TTCGGG--

MA0185.1_Deaf1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGTTCTCGTCCT
----TTCGGG--

MA0411.1_UPC2/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGTTCTCGTCCT
-----TCGTATA

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTTCTCGTCCT
ATGACGTCATCN-

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGTTCTCGTCCT--
-------GTCCTAA

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTCTCGTCCT
TNNNATGATTTCNNCNN