Information for motif44


Reverse Opposite:

p-value:1e-7
log p-value:-1.777e+01
Information Content per bp:1.599
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif10.79%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif3.43%
Average Position of motif in Targets126.5 +/- 84.0bp
Average Position of motif in Background167.2 +/- 45.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GTS1(MacIsaac)/Yeast

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:GTTGGTAG
-TTGGTA-

MA0193.1_Lag1/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GTTGGTAG
-TTGGTAG

MA0313.1_HAP2/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GTTGGTAG
-TTGGT--

P(MYB)/Zea mays/AthaMap

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGTAG
CNGGTAGGT--

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGTAG-----
NNNTTAGGTAGCNTNT

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGTAG----
NCCGTTGCTANGNGN

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------GTTGGTAG--------
NTNNNNNGTTGCTANGGNNCANA

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGTAG----
NNCGTTGCTATGGNN

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGTAG-----
NNTGTAGGTAGCANNT

MA0298.1_FZF1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTTGGTAG
--TGATAG