Information for motif20


Reverse Opposite:

p-value:1e-19
log p-value:-4.387e+01
Information Content per bp:1.729
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif9.91%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets163.6 +/- 74.3bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PHD1/PHD1_BUT90/8-SUT1(Harbison)/Yeast

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTGGAGGGT
GCCGCAGG--

XBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCTGGAGGGT
-CTCGAGGA-

MA0024.2_E2F1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCTGGAGGGT
CGGGCGGGAGG--

SWI5/Literature(Harbison)/Yeast

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAGGGT
GGCTGA-----

MA0471.1_E2F6/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCTGGAGGGT
GGGCGGGAAGG-

MA0470.1_E2F4/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCTGGAGGGT
GGGCGGGAAGG-

MA0403.1_TBF1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTGGAGGGT-
---NTAGGGTT

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTGGAGGGT
--TGCAGGNA

MA0355.1_PHD1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGAGGGT
NGNTGCAGGN-

MA0385.1_SOK2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAGGGT
ACCTGCAGGCA