Information for motif41


Reverse Opposite:

p-value:1e-10
log p-value:-2.429e+01
Information Content per bp:1.690
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif6.60%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets150.3 +/- 86.8bp
Average Position of motif in Background219.8 +/- 42.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAAGAACTTCST-
NATTTAAGTACTTANNA

MA0598.1_EHF/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GAAGAACTTCST-
-----CCTTCCTG

Eip74EF/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GAAGAACTTCST-
-----ACTTCCTG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAAGAACTTCST-----
---NNACTTCCTCTTNN

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAAGAACTTCST-
CTTTAAGTACTTAATG

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAAGAACTTCST
-----GCTTCC-

Eip74EF/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAAGAACTTCST
---ATACTTCCT

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAAGAACTTCST---
-----ACTTCCTBGT

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAAGAACTTCST--
TTCNAAGTACTTNNNNN

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAAGAACTTCST---
-----ACTTCCTGBT