Information for motif13


Reverse Opposite:

p-value:1e-17
log p-value:-4.037e+01
Information Content per bp:1.414
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets145.5 +/- 80.8bp
Average Position of motif in Background150.6 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/Promoter/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCGAATGCGCGK
GTGCGCATGCGC--

MA0506.1_NRF1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCGAATGCGCGK
GCGCCTGCGCA-

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCGAATGCGCGK
CTGCGCATGCGC--

Adf1/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCGAATGCGCGK
-CGACCGCG---

TEC1(MacIsaac)/Yeast

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCGAATGCGCGK
-AGAATGTG---

MA0565.1_FUS3/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGAATGCGCGK
-CGCATGCGC--

MA0406.1_TEC1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGAATGCGCGK
GGGAATGT----

Deaf1/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGAATGCGCGK
CACGAA-------

MA0185.1_Deaf1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGAATGCGCGK
CACGAA-------

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCGAATGCGCGK
AGGAATG-----