Information for motif39


Reverse Opposite:

p-value:1e-13
log p-value:-3.184e+01
Information Content per bp:1.681
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif8.95%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets124.5 +/- 79.7bp
Average Position of motif in Background107.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ABF1/SacCer-Promoters/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCGTCVTCGACG
TCAYTTTNYACG

MA0265.1_ABF1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCGTCVTCGACG-
NNATCACTNNNTACGA

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCGTCVTCGACG
CKTCKTCTTY----

MA0535.1_Mad/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGTCVTCGACG----
-CNGCGNCGGCGCCNG

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCGTCVTCGACG--
NNTTTANNCGACGNA

XBP1(MacIsaac)/Yeast

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCGTCVTCGACG-
-----CTCGAGGA

TGA1(bZIP)/Arabidopsis thaliana/AthaMap

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCGTCVTCGACG
TAACGTCANCAN--

XBP1/Literature(Harbison)/Yeast

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TCGTCVTCGACG
-----CTCGAAG

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TCGTCVTCGACG
NTTATTCGTCATNC---

Deaf1/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCGTCVTCGACG
TTCGGG-------