Information for motif3


Reverse Opposite:

p-value:1e-39
log p-value:-9.062e+01
Information Content per bp:1.718
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.44%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets144.5 +/- 86.0bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PDR1/PDR1_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCGGCCCCG
TTATTCGGCGG--

PDR1(MacIsaac)/Yeast

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCGGCCCCG
TTATTCGGCGG--

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTTTCGGCCCCG
---TCGGCCGA-

MA0544.1_GEI-11/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTTCGGCCCCG
GTGTCGGCCGCT

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCGGCCCCG
DTTTCCCGCC---

RGT1(MacIsaac)/Yeast

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCGGCCCCG
TTTTTCCGGC---

MA0361.1_RDS1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTTTCGGCCCCG
----CGGCCGA-

SKN7(MacIsaac)/Yeast

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTTTCGGCCCCG-
-----GGCCCGGA

MA0429.1_YLL054C/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTTTCGGCCCCG
---TCGGCCG--

Deaf1/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTTTCGGCCCCG
--TTCGGG----