Information for motif22


Reverse Opposite:

p-value:1e-28
log p-value:-6.658e+01
Information Content per bp:1.810
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif7.72%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets163.9 +/- 88.0bp
Average Position of motif in Background220.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0454.1_odd/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTTCTMCTGTTC
CTGCTACTGTT-

odd/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTCTMCTGTTC
-TGCTACTGTT-

MA0261.1_lin-14/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTTCTMCTGTTC
------GTGTTC

MA0261.1_lin-14/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTTCTMCTGTTC
------GTGTTC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTTCTMCTGTTC----
------CTGTTCCTGG

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTMCTGTTC--
TNNTGCTACTGTNNNN

MA0371.1_ROX1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTTCTMCTGTTC--
--CCCATTGTTCTC

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTMCTGTTC--
CNNNGCTACTGTANNN

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCTMCTGTTC
GCTTCC-------

ovo/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTTCTMCTGTTC--
-----ACNGTTACT