Information for motif41


Reverse Opposite:

p-value:1e-13
log p-value:-3.019e+01
Information Content per bp:1.628
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif13.16%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif2.46%
Average Position of motif in Targets181.7 +/- 102.0bp
Average Position of motif in Background213.7 +/- 41.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0262.1_mab-3/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGTTGAGA---
AATGTTGCGAATT

MA0262.1_mab-3/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGTTGAGA---
AATGTTGCGAATT

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGTTGAGA--
GGTGYTGACAGS

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGAGA
GTGTTGN--

Aef1/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGAGA
TTGTTG---

MA0365.1_RFX1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTTGAGA
GGTTGCCA

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGAGA---
GTNTTGTTGTGANNT

Su(H)/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGTTGAGA-
--ATGAGAA

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTTGAGA--
ANNTGACAGN

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTTGAGA
NATGTTGCAA