Information for motif44


Reverse Opposite:

p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.911
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif7.55%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets149.9 +/- 81.9bp
Average Position of motif in Background178.3 +/- 86.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

abd-A/dmmpmm(Down)/fly

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TAGAGATAAATG
-----ATAAAT-

MA0035.3_Gata1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TAGAGATAAATG
-ANAGATAAGAA

DAL80/Literature(Harbison)/Yeast

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TAGAGATAAATG
----GATAA---

DAL80(MacIsaac)/Yeast

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TAGAGATAAATG
----GATAA---

MA0037.2_GATA3/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TAGAGATAAATG
---AGATAAGA-

TFAM/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TAGAGATAAATG
----GATAA---

MA0307.1_GLN3/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TAGAGATAAATG
----GATAA---

MA0482.1_Gata4/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TAGAGATAAATG
NNGAGATAAGA-

SeqBias: GA-repeat

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGAGATAAATG
GAGAGAGAGA--

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TAGAGATAAATG
---AGATAASR-