Information for motif5


Reverse Opposite:

p-value:1e-20
log p-value:-4.812e+01
Information Content per bp:1.732
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif15.15%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets151.1 +/- 64.8bp
Average Position of motif in Background84.6 +/- 53.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0385.1_SOK2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAAGY
NNCCTGCAGGT

XBP1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTGCAAGY
CTTCGAG-

MA0355.1_PHD1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAAGY
NGNTGCAGGN

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAAGY
TNCCTGCA---

nub/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGCAAGY
TTATGCAAGC

MA0274.1_ARR1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGCAAGY
ATTCAANT

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTGCAAGY--
TTTCAAGTGA

MA0253.1_vnd/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTGCAAGY-
TTTCAAGTG

ARR1(MacIsaac)/Yeast

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGCAAGY
ATTCAAGT

sna/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGCAAGY--
--GCAGGTGG