Information for motif30


Reverse Opposite:

p-value:1e-24
log p-value:-5.707e+01
Information Content per bp:1.663
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif10.14%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets154.4 +/- 89.2bp
Average Position of motif in Background162.9 +/- 71.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown5/Drosophila-Promoters/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTTATCAGCG
BSTTATCAGC-

DAL80/Literature(Harbison)/Yeast

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTTATCAGCG
-TTATC----

DAL80(MacIsaac)/Yeast

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTTATCAGCG
-TTATC----

TFAM/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TTTATCAGCG
-TTATC----

MA0542.1_ELT-3/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTTATCAGCG
TCTTATCA---

MA0307.1_GLN3/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTTATCAGCG
-TTATC----

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTATCAGCG
TTTTATTRGN-

MA0165.1_Abd-B/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTATCAGCG
TTTATGA---

PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTATCAGCG
TCTTATCAGT-

Abd-B/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTATCAGCG
TTTTATGA---