Information for motif4


Reverse Opposite:

p-value:1e-37
log p-value:-8.578e+01
Information Content per bp:1.518
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif17.89%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets146.3 +/- 87.6bp
Average Position of motif in Background11.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGAGTCGAMSRA
TCGNNCCGA----

STB4(MacIsaac)/Yeast

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGAGTCGAMSRA
TCGNNCCGA----

Mad/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGAGTCGAMSRA
CGCGGCGCCAG-

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGAGTCGAMSRA
-GCGGCGACA--

PHO2/PHO2_H2O2Hi/[](Harbison)/Yeast

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGAGTCGAMSRA
CGCACCGCACG-

Mad/dmmpmm(Down)/fly

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGAGTCGAMSRA
CGCGACGCCAG-

SWI6(MacIsaac)/Yeast

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGAGTCGAMSRA
CGCGTC------

prd-PD/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CGAGTCGAMSRA
TGTCAACCGTGACGANA--

Deaf1/dmmpmm(Down)/fly

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGAGTCGAMSRA
AGCGCTTCGGGC--

Mad/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGAGTCGAMSRA
-GCGNCGCCNG-