Information for motif30


Reverse Opposite:

p-value:1e-16
log p-value:-3.745e+01
Information Content per bp:1.732
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets144.0 +/- 72.4bp
Average Position of motif in Background131.9 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0297.1_FKH2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTGTATACGCGC
-TGTTTAC----

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GTGTATACGCGC---
---HHCACGCGCBTN

MA0031.1_FOXD1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTGTATACGCGC
ATGTTTAC----

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGTATACGCGC
CTGTTTAC----

MA0557.1_FHY3/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTGTATACGCGC---
---CTCACGCGCTCA

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTGTATACGCGC
NYYTGTTTACHN--

MA0458.1_slp1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTGTATACGCGC
TTGTTTACATT-

slp1/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTGTATACGCGC
NTGTTTACATT-

MA0329.1_MBP1/Jaspar

Match Rank:9
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GTGTATACGCGC-
------ACGCGTA

MA0157.1_FOXO3/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGTATACGCGC
-TGTTTACA---