| p-value: | 1e-16 |
| log p-value: | -3.833e+01 |
| Information Content per bp: | 1.668 |
| Number of Target Sequences with motif | 17.0 |
| Percentage of Target Sequences with motif | 12.88% |
| Number of Background Sequences with motif | 1.4 |
| Percentage of Background Sequences with motif | 0.89% |
| Average Position of motif in Targets | 169.9 +/- 70.6bp |
| Average Position of motif in Background | 12.5 +/- 0.4bp |
| Strand Bias (log2 ratio + to - strand density) | -0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.18 |
| Motif File: | file (matrix) reverse opposite |
| PDF Format Logos: | forward logo reverse opposite |
PB0136.1_IRC900814_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTCACGATTTTA--- TTTTACGACTTTCCAT |
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PH0047.1_Hoxa11/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTCACGATTTTA NNGTTTTACGACTTTA |
|

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PH0066.1_Hoxc11/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTCACGATTTTA NNNTTTTACGACNTTN |
|

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|
PH0076.1_Hoxd11/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTCACGATTTTA ANNATTTTACGACNTNA |
|

|
|
PH0065.1_Hoxc10/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTCACGATTTTA ANNTTTTACGACNTNN |
|

|
|
BEAF-32B/dmmpmm(Pollard)/fly
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TTCACGATTTTA ---ACGATACT- |
|

|
|
PH0077.1_Hoxd12/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTCACGATTTTA NNNATTTTACGACNNTN |
|

|
|
PH0067.1_Hoxc12/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTCACGATTTTA GNNNTTTTACGACCTNA |
|

|
|
croc/dmmpmm(Bergman)/fly
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | 7 |
| Orientation: | reverse strand |
| Alignment: | TTCACGATTTTA- -------TTTTAT |
|

|
|
br-Z2/dmmpmm(Bergman)/fly
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTCACGATTTTA TTAACTATTT-- |
|

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