Information for motif15


Reverse Opposite:

p-value:1e-29
log p-value:-6.890e+01
Information Content per bp:1.741
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif5.31%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets166.2 +/- 83.6bp
Average Position of motif in Background277.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0261.1_lin-14/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:AATGCGAACACG
-----GAACAC-

MA0261.1_lin-14/Jaspar

Match Rank:2
Score:0.69
Offset:5
Orientation:forward strand
Alignment:AATGCGAACACG
-----GAACAC-

YER051W(MacIsaac)/Yeast

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AATGCGAACACG
--TTCGAA----

MA0401.1_SWI4/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATGCGAACACG
-ACGCGAAA---

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATGCGAACACG
AAACGCGAAA---

kni/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATGCGAACACG
AAATGAGATC---

MA0546.1_PHA-4/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATGCGAACACG
AAAGTAAACA--

SWI4(MacIsaac)/Yeast

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AATGCGAACACG
-ACGCGAAAA--

STB1(MacIsaac)/Yeast

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AATGCGAACACG
--CGCGAAAA--

Su(H)/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AATGCGAACACG
-ATGAGAA----