Information for motif26


Reverse Opposite:

p-value:1e-17
log p-value:-4.035e+01
Information Content per bp:1.539
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets166.2 +/- 89.6bp
Average Position of motif in Background92.5 +/- 74.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0260.1_che-1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGGCTTCAGT
-GGTTTC---

MA0260.1_che-1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGGCTTCAGT
-GGTTTC---

Initiator/Drosophila-Promoters/Homer

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GGGCTTCAGT--
----NTCAGTYG

GCR1(MacIsaac)/Yeast

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGCTTCAGT
GGGCTTCCA-

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGGCTTCAGT
--GCTTCC--

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTTCAGT----
CNNNGCTACTGTANNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGCTTCAGT
TGGTTTCAGT

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTTCAGT----
TNNTGCTACTGTNNNN

MA0304.1_GCR1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGCTTCAGT
-GGCTTCCA-

ROX1(MacIsaac)/Yeast

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTTCAGT
GCGGGCTTNT--