Information for motif1


Reverse Opposite:

p-value:1e-33
log p-value:-7.665e+01
Information Content per bp:1.713
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif21.21%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets163.3 +/- 74.4bp
Average Position of motif in Background139.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGKAAAAACG
TGGAAAA---

dl-A/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGKAAAAACG-
NGGAAAAACCC

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGKAAAAACG
AATGGAAAAT--

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGKAAAAACG-
CAATTGCAAAAATAT

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGKAAAAACG
TGTAAACA--

hb/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGKAAAAACG
--AAAAAA--

MA0022.1_dl_1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGKAAAAACG--
NGGAAAAACCCC

gt/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGKAAAAACG
-GTAAAAA--

MA0294.1_EDS1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGKAAAAACG
CGGAAAAAT-

RGT1(MacIsaac)/Yeast

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGKAAAAACG
GCCGGAAAAA--