Information for motif5


Reverse Opposite:

p-value:1e-30
log p-value:-6.935e+01
Information Content per bp:1.755
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif13.68%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets156.1 +/- 92.8bp
Average Position of motif in Background134.5 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACACSGGV
AYTAAACCGG-

ABF1(bZIP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACACSGGV-
ACACGTGGC

MA0128.1_EmBP-1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACACSGGV
ACACGTGG

MA0280.1_CAT8/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ACACSGGV-
---CCGGAA

prd/dmmpmm(Down)/fly

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACACSGGV
AAACTG--

PL0009.1_hlh-26/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ACACSGGV----
NNNNGACACGTGCCNTN

STB5(MacIsaac)/Yeast

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ACACSGGV
TATAACACCG--

YML081W(MacIsaac)/Yeast

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACACSGGV
TTCAGACTGG-

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACACSGGV-
NNCACCTGNN

SPT2/SPT2_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ACACSGGV
TTAGAGACAGG-