Information for motif2


Reverse Opposite:

p-value:1e-22
log p-value:-5.256e+01
Information Content per bp:1.766
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif22.73%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets146.0 +/- 85.3bp
Average Position of motif in Background233.7 +/- 49.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0328.1_MATALPHA2/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:ARAATTACAT-
--AATTACATG

MA0318.1_HMRA2/Jaspar

Match Rank:2
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:ARAATTACAT-
---ATTACATG

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ARAATTACAT----
TNGAATTTCATTNAN

sd/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ARAATTACAT--
CAAATTTCATTT

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ARAATTACAT-
-GCATTCCAGN

ara/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ARAATTACAT-
-AAATAACAAA

YAP6(MacIsaac)/Yeast

Match Rank:7
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ARAATTACAT--
----TTACATAA

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ARAATTACAT-------
NNTATTACATGTANNNT

MA0075.1_Prrx2/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ARAATTACAT
--AATTA---

PH0083.1_Irx3_1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ARAATTACAT-------
ANTATTACATGTANNNN