Information for motif9


Reverse Opposite:

p-value:1e-24
log p-value:-5.625e+01
Information Content per bp:1.709
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif11.79%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets168.5 +/- 86.3bp
Average Position of motif in Background207.9 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0401.1_SWI4/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCRCGTATTWT
TTTCGCGT-----

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTCRCGTATTWT
TTTCGCGTTT---

SWI4(MacIsaac)/Yeast

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTCRCGTATTWT
TTTTCGCGT-----

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTCRCGTATTWT
TTTCGCGT-----

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCRCGTATTWT
TTTCGCGTC----

Hsf/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTCRCGTATTWT---
-TCTAGAAGATTCGA

STB1(MacIsaac)/Yeast

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTCRCGTATTWT
TTTTCGCG------

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTCRCGTATTWT
AGTATTCTCGGTTGC-

MA0329.1_MBP1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTCRCGTATTWT
NNCGCGT-----

HSF1/HSF1_H2O2Lo/11-HSF1(Harbison)/Yeast

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCRCGTATTWT-
TTCTAGNNCNTTC