Information for motif41


Reverse Opposite:

p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.564
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif10.61%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets174.0 +/- 71.5bp
Average Position of motif in Background193.0 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0256.1_zen/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TYAKTADYSTHT
TCATTAG-----

YOX1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TYAKTADYSTHT
CGTCANTATTCT--

Scr/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TYAKTADYSTHT
GTCATTAANG---

MA0203.1_Scr/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TYAKTADYSTHT
TCATTAA-----

zen/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TYAKTADYSTHT
NTCATTAGGN---

Scr/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TYAKTADYSTHT
NTCATTAANG---

br-Z1/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TYAKTADYSTHT
TTAGTATT----

MA0238.1_pb/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TYAKTADYSTHT
TAATTAA-----

Dfd/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TYAKTADYSTHT
TCATTAA-----

MA0186.1_Dfd/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TYAKTADYSTHT
TCATTAA-----