Information for motif40


Reverse Opposite:

p-value:1e-11
log p-value:-2.584e+01
Information Content per bp:1.712
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif8.96%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets138.6 +/- 79.9bp
Average Position of motif in Background158.8 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

XBP1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCTTAGAGC
--CTTCGAG-

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCTTAGAGC
GGTGYTGACAGS

YAP5(MacIsaac)/Yeast

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTAGAGC
ATGCTT-----

vvl/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCTTAGAGC
TGAATA----

MA0417.1_YAP5/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTAGAGC
ATGCTT-----

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCTTAGAGC---
TATCATTAGAACGCT

MA0124.1_NKX3-1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCTTAGAGC
ATACTTA----

MA0157.1_FOXO3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCTTAGAGC
TGTTTACA--

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCTTAGAGC----
ATTTCCTTTGATCTATA

vvl/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCTTAGAGC
TGCATAA---