Information for motif31


Reverse Opposite:

p-value:1e-15
log p-value:-3.504e+01
Information Content per bp:1.859
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif10.85%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets180.0 +/- 83.2bp
Average Position of motif in Background99.9 +/- 65.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SKO1(MacIsaac)/Yeast

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:CTGACGTA
ATGACGTA

MA0129.1_TGA1A/Jaspar

Match Rank:2
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:CTGACGTA
-TGACGTA

MA0096.1_bZIP910/Jaspar

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CTGACGTA
ATGACGT-

MA0286.1_CST6/Jaspar

Match Rank:4
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CTGACGTA-
ATGACGTAA

SKO1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:CTGACGTA
-TGACGT-

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.90
Offset:1
Orientation:forward strand
Alignment:CTGACGTA
-TGACGT-

MA0588.1_TGA1/Jaspar

Match Rank:7
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--CTGACGTA-
TGGTGACGTAA

TGA1(bZIP)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CTGACGTA-
TTGATGACGTTA

STF1(bZIP)/Glycine max/AthaMap

Match Rank:9
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CTGACGTA---
AATGACGTCATT

MA0018.2_CREB1/Jaspar

Match Rank:10
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CTGACGTA-
-TGACGTCA