Information for motif16


Reverse Opposite:

p-value:1e-26
log p-value:-6.043e+01
Information Content per bp:1.794
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif14.52%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets165.0 +/- 84.0bp
Average Position of motif in Background139.0 +/- 43.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR2(MacIsaac)/Yeast

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGGAAGCA
NGGAAGC-

MA0305.1_GCR2/Jaspar

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GGGAAGCA
NGGAAGC-

Rel/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGGAAGCA--
GGGGAATCCCN

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGGAAGCA
-NGAAGC-

GCR1(MacIsaac)/Yeast

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGGAAGCA-
TGGAAGCCC

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGGAAGCA----
AGGAAACAGCTG

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGGAAGCA-
-GTAAACAG

PUT3(MacIsaac)/Yeast

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGAAGCA-------
CGGGAAGCCACCCCCG

MA0304.1_GCR1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGAAGCA
TGGAAGCC

YAP5(MacIsaac)/Yeast

Match Rank:10
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGGAAGCA-
---AAGCAT