Information for motif3


Reverse Opposite:

p-value:1e-22
log p-value:-5.151e+01
Information Content per bp:1.623
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif15.91%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets154.6 +/- 86.3bp
Average Position of motif in Background262.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0307.1_GLN3/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:STAKCYTM
TTATC---

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----STAKCYTM----
GATAACATCCTAGTAG

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:STAKCYTM-
--GTCCTAA

CRZ1(MacIsaac)/Yeast

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:STAKCYTM
-CAGCCAC

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:STAKCYTM
-CAGCC--

MA0199.1_Optix/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:STAKCYTM
-TATCA--

So/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-STAKCYTM-
NGTATCATTN

GLN3/GLN3_RAPA/8-GZF3,11-GLN3(Harbison)/Yeast

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:STAKCYTM--
-TATCTTATC

ARR10(GARP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--STAKCYTM--
GCGGATCTTANC

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----STAKCYTM----
NTNNCGTATCCAAGTNN