Information for motif8


Reverse Opposite:

p-value:1e-31
log p-value:-7.356e+01
Information Content per bp:1.744
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif13.28%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets127.4 +/- 76.0bp
Average Position of motif in Background156.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0588.1_TGA1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ACGTCACCGGCG
TNACGTCANCA---

YDR520C(MacIsaac)/Yeast

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ACGTCACCGGCG--
---TCTCCGGCGGA

SKO1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACGTCACCGGCG
ACGTCA------

MA0286.1_CST6/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACGTCACCGGCG
TTACGTCAT-----

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACGTCACCGGCG
ACGTCA------

CRE(bZIP)/Promoter/Homer

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACGTCACCGGCG
GTGACGTCACCG---

MA0129.1_TGA1A/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACGTCACCGGCG
TACGTCA------

MA0096.1_bZIP910/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACGTCACCGGCG
ACGTCAG-----

STF1(bZIP)/Glycine max/AthaMap

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACGTCACCGGCG
NATGACGTCATC----

PB0004.1_Atf1_1/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ACGTCACCGGCG
ACGATGACGTCATCGA--