Information for motif34


Reverse Opposite:

p-value:1e-16
log p-value:-3.787e+01
Information Content per bp:1.673
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif10.79%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets150.8 +/- 91.6bp
Average Position of motif in Background108.1 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0354.1_PDR8/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGCGGAGAAG
-ACGGAGAT-

SUT1(MacIsaac)/Yeast

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGCGGAGAAG
CGCGGGG---

MA0399.1_SUT1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGCGGAGAAG
CGCGGGG---

MA0283.1_CHA4/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGCGGAGAAG
GGCGGAGA--

MA0432.1_YNR063W/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCGGAGAAG
-TCGGAGAT-

MA0320.1_IME1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCGGAGAAG
CCGCCGAG---

IME1(MacIsaac)/Yeast

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGCGGAGAAG
CCGCCGAG---

MA0352.1_PDR1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGAGAAG
TCCGCGGA----

MA0353.1_PDR3/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCGGAGAAG
TCCGCGGA----

PDR3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCGGAGAAG
TCCGCGGA----