Information for motif2


Reverse Opposite:

p-value:1e-39
log p-value:-9.029e+01
Information Content per bp:1.654
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif15.35%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets177.1 +/- 80.2bp
Average Position of motif in Background107.4 +/- 49.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI6(MacIsaac)/Yeast

Match Rank:1
Score:0.71
Offset:6
Orientation:forward strand
Alignment:ARWCGCGWCGCG
------GACGCG

MBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:ARWCGCGWCGCG-
------GACGCGT

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:3
Score:0.68
Offset:6
Orientation:forward strand
Alignment:ARWCGCGWCGCG-
------GACGCGT

MA0374.1_RSC3/Jaspar

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:ARWCGCGWCGCG
-----NNGCGCG

MA0329.1_MBP1/Jaspar

Match Rank:5
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:ARWCGCGWCGCG-
------NNCGCGT

MA0330.1_MBP1::SWI6/Jaspar

Match Rank:6
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:ARWCGCGWCGCG-
------AACGCGT

PHO2/PHO2_H2O2Hi/[](Harbison)/Yeast

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ARWCGCGWCGCG
-CGTGCGGTGCG

STP1(MacIsaac)/Yeast

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ARWCGCGWCGCG
----GCGCCGCA

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ARWCGCGWCGCG------
---TCCGTCGCTTAAAAG

MA0394.1_STP1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ARWCGCGWCGCG
----GCGCCGCA