Information for motif12


Reverse Opposite:

p-value:1e-21
log p-value:-4.997e+01
Information Content per bp:1.704
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif10.85%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets128.7 +/- 85.0bp
Average Position of motif in Background124.3 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0381.1_SKN7/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCGCACT
NTGGCC-----

Unknown3/Drosophila-Promoters/Homer

Match Rank:2
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TGGCCGCACT
ACVAKCTGGCAGCGC-

Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGCACT-
MYGGTCACACTG

MA0567.1_ERF1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGCCGCACT
TGGCGGCG--

MA0361.1_RDS1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGCCGCACT
CGGCCGA---

RDS1(MacIsaac)/Yeast

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGGCCGCACT
CGGCCG----

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGGCCGCACT
-GGCGGCG--

MA0161.1_NFIC/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGCACT
TTGGCA-----

STP1(MacIsaac)/Yeast

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGCCGCACT
GCGCCGCA--

MA0429.1_YLL054C/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCGCACT
TCGGCCG----