Information for motif12


Reverse Opposite:

p-value:1e-25
log p-value:-5.878e+01
Information Content per bp:1.545
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif13.68%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets147.7 +/- 102.9bp
Average Position of motif in Background51.1 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AtMYB15(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GGTAGGCGGT
CGACGGTAGGTGG-

MA0574.1_AtMYB15/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GGTAGGCGGT
CGACGGTAGGTGG-

AtMYB84(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GGTAGGCGGT
GGGGGGTAGGTGG-

MA0576.1_AtMYB84/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GGTAGGCGGT
GGGGGGTAGGTGG-

Run/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GGTAGGCGGT-
----GGCGGTG

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTAGGCGGT
NGCGTGGGCGGR

btd/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGTAGGCGGT-
-GGGGGCGGAT

MA0443.1_btd/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGTAGGCGGT
AGGGGGCGGA

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGTAGGCGGT-
-NGGGGCGGTG

P(MYB)/Zea mays/AthaMap

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGTAGGCGGT
CNGGTAGGT---