Information for motif45


Reverse Opposite:

p-value:1e-6
log p-value:-1.575e+01
Information Content per bp:1.620
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets175.9 +/- 81.9bp
Average Position of motif in Background204.4 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0075.1_Sp100_1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGCGAGCAA-
ATTTTCCGNNAAAT

Stat92E/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCGAGCAA-----
NNNNATTTCCGGGAAANNTNN

MA0326.1_MAC1/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:ATTTGCGAGCAA-
-----TGAGCAAA

PB0006.1_Bcl6b_1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATTTGCGAGCAA----
TCTTTCGAGGAATTTG

MAC1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.64
Offset:6
Orientation:forward strand
Alignment:ATTTGCGAGCAA-
------GAGCAAA

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCGAGCAA-
ANATTTTACGAGNNNN

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCGAGCAA-
NAATTTTACGAGNTNN

MA0532.1_STAT92E/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTTGCGAGCAA
CGGAATTCCAGGAAA

MA0520.1_Stat6/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATTTGCGAGCAA---
ANTTCTCAGGAANNN

MA0144.2_STAT3/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATTTGCGAGCAA
-TTTCCCAGAAN