Information for motif13


Reverse Opposite:

p-value:1e-21
log p-value:-4.997e+01
Information Content per bp:1.670
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif10.85%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets138.8 +/- 88.3bp
Average Position of motif in Background104.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MBP1(MacIsaac)/Yeast

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CSAAACACGTCG
----ACGCGTC-

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CSAAACACGTCG
----ACGCGTC-

SWI6(MacIsaac)/Yeast

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CSAAACACGTCG
-----CGCGTC-

MA0310.1_HAC1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CSAAACACGTCG
---GACACGTG-

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CSAAACACGTCG
----GCACGTNC

MA0129.1_TGA1A/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CSAAACACGTCG
-----TACGTCA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CSAAACACGTCG
------ACGTCA

SKO1/Literature(Harbison)/Yeast

Match Rank:8
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CSAAACACGTCG
------ACGTCA

MA0330.1_MBP1::SWI6/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CSAAACACGTCG
---AACGCGT--

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CSAAACACGTCG--------
-----TCCGTCGCTTAAAAG