Information for motif3


Reverse Opposite:

p-value:1e-37
log p-value:-8.688e+01
Information Content per bp:1.600
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif14.94%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets122.1 +/- 66.6bp
Average Position of motif in Background115.7 +/- 45.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

grh/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CTGGTTAG
CTGGTT--

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----CTGGTTAG----
GAAAACTAGTTAACATC

grh/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CTGGTTAG
CTGGTTC-

ACE2(MacIsaac)/Yeast

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTTAG
GGCGGGTT--

Lbe/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTGGTTAG--
CTAGTTAACN

MA0402.1_SWI5/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CTGGTTAG
TGCTGGTT--

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTGGTTAG
TGCTGGT---

SWI5(MacIsaac)/Yeast

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTGGTTAG
TGCTGGTT--

grh/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTGGTTAG--
CTGGTTTTAT

MA0231.1_lbe/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGGTTAG
-TAGTTA-