Information for motif20


Reverse Opposite:

p-value:1e-16
log p-value:-3.833e+01
Information Content per bp:1.800
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif12.88%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets152.9 +/- 93.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0491.1_JUND/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---GACTCATG
GGTGACTCATC

MA0476.1_FOS/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GACTCATG
TGTGACTCATT

MA0477.1_FOSL1/Jaspar

Match Rank:3
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---GACTCATG
GGTGACTCATG

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GACTCATG
TGACTCA--

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GACTCATG
ATGACTCATC

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GACTCATG
DATGASTCAT-

GCN4(MacIsaac)/Yeast

Match Rank:7
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GACTCATG
ATGACTCA--

MA0490.1_JUNB/Jaspar

Match Rank:8
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GACTCATG
GGATGACTCAT-

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:9
Score:0.76
Offset:-7
Orientation:forward strand
Alignment:-------GACTCATG
AGGAGATGACTCAT-

MA0478.1_FOSL2/Jaspar

Match Rank:10
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GACTCATG
GGATGACTCAT-