Information for motif21


Reverse Opposite:

p-value:1e-20
log p-value:-4.630e+01
Information Content per bp:1.738
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif11.58%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets127.0 +/- 75.8bp
Average Position of motif in Background128.4 +/- 54.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0507.1_POU2F2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ATRCATWT---
ATATGCAAATNNN

MA0274.1_ARR1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATRCATWT
ATTCAANT

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ATRCATWT
ATATGCAAAT

ARR1(MacIsaac)/Yeast

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATRCATWT
ATTCAAGT

sd/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATRCATWT-
ANAAATNCA

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ATRCATWT
TTATGCAAAT

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ATRCATWT----
TTGTATGCAAATTAGA

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ATRCATWT----
TTGTATGCAAATTAGA

CST6(MacIsaac)/Yeast

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATRCATWT-
-TGCATTTN

TEIL(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATRCATWT
ATGTACCT