Information for motif41


Reverse Opposite:

p-value:1e-13
log p-value:-3.191e+01
Information Content per bp:1.537
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif7.47%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets130.6 +/- 80.9bp
Average Position of motif in Background50.3 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ID1(C2H2(Zn))/Zea mays/AthaMap

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GATAACGACA--
-AAAACGACAAA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GATAACGACA
AGATAASR---

DAL80/Literature(Harbison)/Yeast

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATAACGACA
GATAA-----

DAL80(MacIsaac)/Yeast

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATAACGACA
GATAA-----

Dref/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GATAACGACA-
-ATATCGATAG

Dref/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GATAACGACA-
-ATATCGATAG

TFAM/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GATAACGACA
GATAA-----

srp/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GATAACGACA
GCGATAAGAN--

MA0309.1_GZF3/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GATAACGACA
TGATAAGA---

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GATAACGACA
NBWGATAAGR---