Information for motif28


Reverse Opposite:

p-value:1e-16
log p-value:-3.878e+01
Information Content per bp:1.824
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif15.26%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif2.12%
Average Position of motif in Targets135.6 +/- 79.6bp
Average Position of motif in Background66.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YAP5(MacIsaac)/Yeast

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCATSCTT
--ATGCTT

MA0417.1_YAP5/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCATSCTT
--ATGCTT

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCATSCTT
-CATTCCT

MA0095.2_YY1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCATSCTT
GCNGCCATCTTG

MA0164.1_Nr2e3/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCATSCTT
-CAAGCTT

MA0581.1_LEC2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCATSCTT--
TGCATGCACAT

PL0008.1_hlh-29/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCATSCTT-----
TNNGCCACGCGTGNNNN

TEC1(MacIsaac)/Yeast

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCATSCTT
CACATTCT-

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCATSCTT----
GATAACATCCTAGTAG

MA0124.1_NKX3-1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCATSCTT-
--ATACTTA