Information for motif36


Reverse Opposite:

p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.394
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif9.43%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets129.7 +/- 95.7bp
Average Position of motif in Background76.6 +/- 46.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0246.1_so/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AGGATCAN
-GTATCA-

bcd-2/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGGATCAN
-GGATTAA

MA0212.1_bcd/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGGATCAN
-GGATTA-

MA0201.1_Ptx1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGGATCAN
-GGATTAA

MA0460.1_ttk/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGGATCAN
AAGGATAAT

bcd/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGGATCAN--
NGGATTAACC

ZmHOX2a(2)(HD-HOX)/Zea mays/AthaMap

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGGATCAN
CAGATCA-

MA0234.1_oc/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGGATCAN
-GGATTA-

oc/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGGATCAN
-GGATTAA

Oc/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGGATCAN--
NGGATTAANN