Information for motif38


Reverse Opposite:

p-value:1e-11
log p-value:-2.584e+01
Information Content per bp:1.700
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif8.96%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets143.8 +/- 81.1bp
Average Position of motif in Background236.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTAGGCCACA
CTAGGCCT--

MA0334.1_MET32/Jaspar

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CTAGGCCACA
---CGCCACA

MET31(MacIsaac)/Yeast

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CTAGGCCACA--
----GCCACACC

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTAGGCCACA
CNAGGCCT--

MET32(MacIsaac)/Yeast

Match Rank:5
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CTAGGCCACA----
----GCCACAGTTT

MA0333.1_MET31/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CTAGGCCACA--
---CGCCACANN

MA0381.1_SKN7/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTAGGCCACA
---GGCCAT-

MA0285.1_CRZ1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTAGGCCACA
CTAAGCCAC-

MA0002.2_RUNX1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTAGGCCACA---
--AAACCACAGAN

MA0332.1_MET28/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CTAGGCCACA-
-----CCACAG