Information for motif37


Reverse Opposite:

p-value:1e-15
log p-value:-3.459e+01
Information Content per bp:1.701
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif5.15%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets150.3 +/- 84.3bp
Average Position of motif in Background169.3 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0044.1_HMG-1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTGTCCTCTCG
GTTGTACTC---

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTGTCCTCTCG--
NNNNTTGACCCCTNNNN

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTTGTCCTCTCG-----
--ACCACTCTCGGTCAC

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTTGTCCTCTCG-----
--NNAATTCTCGNTNAN

MA0405.1_TEA1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTTGTCCTCTCG
-ATGCCCGC---

ttk/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GTTGTCCTCTCG
TTNGATTATCCTTG--

MA0460.1_ttk/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTTGTCCTCTCG
ATTATCCTT---

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTTGTCCTCTCG-----
--AGTATTCTCGGTTGC

MA0133.1_BRCA1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTCCTCTCG
GTGTTGN-------

Trl/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTTGTCCTCTCG--
-TTNCTCTCTCTCT