Information for motif17


Reverse Opposite:

p-value:1e-31
log p-value:-7.237e+01
Information Content per bp:1.895
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif6.43%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets148.5 +/- 90.6bp
Average Position of motif in Background170.1 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0168.1_B-H1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TAATCGCG
TTAATTG--

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TAATCGCG----
NNTAATCCNGNCNN

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAATCGCG
CTAATKGV-

MA0171.1_CG11085/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAATCGCG
TTAATTG--

CG11085/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TAATCGCG
NNTTAATTGG-

ap/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TAATCGCG
TAATNN--

MA0169.1_B-H2/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAATCGCG
TTAATTG--

MA0248.1_tup/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAATCGCG
TTAATTG--

MA0214.1_bsh/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAATCGCG
TTAATTG--

Gsc/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TAATCGCG
TAATCC--