Information for motif28


Reverse Opposite:

p-value:1e-16
log p-value:-3.798e+01
Information Content per bp:1.745
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif8.96%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets165.0 +/- 77.1bp
Average Position of motif in Background129.0 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Cf2/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:AGTATATATA
-GTATATATA

MA0015.1_Cf2_II/Jaspar

Match Rank:2
Score:0.88
Offset:1
Orientation:forward strand
Alignment:AGTATATATA-
-GTATATATAC

MA0386.1_TBP/Jaspar

Match Rank:3
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----AGTATATATA-------
NNNNAATATATATANCTANNN

SeqBias: TA-repeat

Match Rank:4
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AGTATATATA--
--TATATATATA

TBP(- other)/several species/AthaMap

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:AGTATATATA--
GGTATTTATAGN

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AGTATATATA----
TCTTTATATATAAATA

PB0163.1_Six6_2/Jaspar

Match Rank:7
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---AGTATATATA----
ANNNGGATATATCCNNN

TATA-box/SacCer-Promoters/Homer

Match Rank:8
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:AGTATATATA--
--TATATAWDVV

MA0345.1_NHP6A/Jaspar

Match Rank:9
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----AGTATATATA-------
ATGACCTATATATAAAAATGA

PB0198.1_Zfp128_2/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGTATATATA----
TGTATATATATACC