Information for motif7


Reverse Opposite:

p-value:1e-19
log p-value:-4.456e+01
Information Content per bp:1.681
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif22.73%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif2.98%
Average Position of motif in Targets143.9 +/- 87.5bp
Average Position of motif in Background76.1 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TATGTTCCTG-
-CTGTTCCTGG

kni/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TATGTTCCTG
TTTGTTCCC-

Caup/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TATGTTCCTG
NNTGTTATTG

RAV1(1)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TATGTTCCTG
NTTCTGTTGCNN

MA0582.1_RAV1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TATGTTCCTG
NTTCTGTTGCNN

SOK2(MacIsaac)/Yeast

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TATGTTCCTG-
---TTGCCTGC

TEIL(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TATGTTCCTG
-ATGTACCT-

grh/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TATGTTCCTG--
----TACCTGCT

MA0007.2_AR/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TATGTTCCTG
GNACANNNTGTTCTT-

dl/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TATGTTCCTG
GGATTTTCC--