Information for motif37


Reverse Opposite:

p-value:1e-16
log p-value:-3.730e+01
Information Content per bp:1.677
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif8.30%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets156.1 +/- 87.1bp
Average Position of motif in Background107.0 +/- 40.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATGTATTWTAAT----
NCGTATTATAATCNTA

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATGTATTWTAAT----
TATAATTATAATATTC

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATGTATTWTAAT----
NNTAATTATAATNANN

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATGTATTWTAAT----
GCTAATTATAATTATC

Antp/dmmpmm(Down)/fly

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGTATTWTAAT
ATAAATAATAAT

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGTATTWTAAT-----
NTNAATTTTATTGNATT

Mirr/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATGTATTWTAAT
NNTGTTTTTT---

gt/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATGTATTWTAAT
----TTTTTA--

br-Z1/dmmpmm(Down)/fly

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATGTATTWTAAT
---TATTATTAT

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGTATTWTAAT---
CCGTATTATAAACAA