Information for motif46


Reverse Opposite:

p-value:1e-5
log p-value:-1.378e+01
Information Content per bp:1.680
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif6.13%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets143.8 +/- 84.9bp
Average Position of motif in Background221.2 +/- 70.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTATADGGTTKG--
NNGTANTGTTTTNC

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTATADGGTTKG
-NNTGTGGTTT-

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TTATADGGTTKG
AAACATAATGAGGTTGC

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTATADGGTTKG
--CTGTGGTTTN

MA0511.1_RUNX2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTATADGGTTKG
GGGGTTTGTGGTTTG

MA0448.1_H2.0/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTATADGGTTKG
TTAATTA------

PB0135.1_Hoxa3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTATADGGTTKG
CCTTAATNGNTTTT-

PH0151.1_Pou6f1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTATADGGTTKG
GACGATAATGAGCTTGC

H2/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTATADGGTTKG
NNTTAATTAA-----

Aef1/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTATADGGTTKG
---TGTTGTTG-