Information for motif15


Reverse Opposite:

p-value:1e-20
log p-value:-4.689e+01
Information Content per bp:1.780
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif10.38%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets134.9 +/- 70.1bp
Average Position of motif in Background129.2 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0293.1_ECM23/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AAGATCTKTT
NNNAGATCTNN-

MA0302.1_GAT4/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AAGATCTKTT
NNTAGATCTNN-

sd/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAGATCTKTT
AANATGTNT-

MA0121.1_ARR10/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAGATCTKTT
-AGATCCGC-

AGP1(GATA)/Nicotiana tabacum/AthaMap

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AAGATCTKTT
NTAGATCTGA-

ARR10(GARP)/Arabidopsis thaliana/AthaMap

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAGATCTKTT
GCGAAGATCCGC-

MA0378.1_SFP1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------AAGATCTKTT-----
CNGNAGAAAATTTTTTNNNNT

MA0389.1_SRD1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAGATCTKTT
GTAGATCT---

MA0301.1_GAT3/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AAGATCTKTT
NNTAGATCT---

SFP1/SacCer-Promoters/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAGATCTKTT-
RAAAATTTTTHH