Information for motif30


Reverse Opposite:

p-value:1e-17
log p-value:-4.023e+01
Information Content per bp:1.664
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif11.20%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets169.1 +/- 70.3bp
Average Position of motif in Background98.6 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br-Z4/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.68
Offset:6
Orientation:forward strand
Alignment:ATTTTAGCTAAT
------ACTAAT

MA0387.1_SPT2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATTTTAGCTAAT
-AATTAAAGAA-

MA0132.1_Pdx1/Jaspar

Match Rank:3
Score:0.66
Offset:7
Orientation:forward strand
Alignment:ATTTTAGCTAAT-
-------CTAATT

SPT2(MacIsaac)/Yeast

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ATTTTAGCTAAT-
---TTCTTTAANT

PH0101.1_Lmx1b/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATTTTAGCTAAT---
AGTTTTTAATTAATTTG

ap/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.64
Offset:8
Orientation:forward strand
Alignment:ATTTTAGCTAAT--
--------TAATNN

MA0284.1_CIN5/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATTTTAGCTAAT-
---TTACGTAATC

PH0095.1_Lhx5/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTAGCTAAT---
ANNATTTAATTAATTNN

PH0167.1_Tcf1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATTTTAGCTAAT-----
NTTTTAGTTAACNNAGN

PH0093.1_Lhx3/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTAGCTAAT---
NNTATTTAATTAATTNN