Information for motif19


Reverse Opposite:

p-value:1e-28
log p-value:-6.591e+01
Information Content per bp:1.695
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif5.15%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets131.2 +/- 81.9bp
Average Position of motif in Background53.1 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:MGAATTCATTTC
----TTGATTTC

SPT23(MacIsaac)/Yeast

Match Rank:2
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:MGAATTCATTTC
----TTGATTTC

MA0388.1_SPT23/Jaspar

Match Rank:3
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:MGAATTCATTTC
----TTGATTTC

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:MGAATTCATTTC-----
TNNNATGATTTCNNCNN

tll/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:MGAATTCATTTC
----TTAATTT-

en/dmmpmm(Down)/fly

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:MGAATTCATTTC
---TTTAATT--

eve/dmmpmm(Down)/fly

Match Rank:7
Score:0.68
Offset:4
Orientation:forward strand
Alignment:MGAATTCATTTC
----ATNATTT-

abd-A/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:MGAATTCATTTC
---ATTAATT--

en/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:MGAATTCATTTC
---NTTAATTG-

CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:MGAATTCATTTC
NAAATTSAATTT