Information for motif8


Reverse Opposite:

p-value:1e-38
log p-value:-8.766e+01
Information Content per bp:1.705
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif7.35%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets151.7 +/- 82.3bp
Average Position of motif in Background139.8 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STB1(MacIsaac)/Yeast

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCGAGRARAMGC
-CGCGAAAA---

XBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCGAGRARAMGC
CTCGAGGA-----

MA0414.1_XBP1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCGAGRARAMGC
CTCGAGA------

MA0326.1_MAC1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCGAGRARAMGC
-TGAGCAAA---

MAC1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCGAGRARAMGC
--GAGCAAA---

SWI4(MacIsaac)/Yeast

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCGAGRARAMGC
ACGCGAAAA---

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCGAGRARAMGC
ACGCGAAA----

dl/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCGAGRARAMGC-
--GGGGAAAATCC

XBP1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCGAGRARAMGC
CTTCGAG-------

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCGAGRARAMGC
TCCGTCGCTTAAAAG-