Information for motif10


Reverse Opposite:

p-value:1e-23
log p-value:-5.309e+01
Information Content per bp:1.664
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif11.32%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets126.6 +/- 69.8bp
Average Position of motif in Background85.9 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGATGAAA--
NNNNNATTGATGNGTGN

PH0150.1_Pou4f3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTATTGATGAAA--
AGTTATTAATGAGGTC

Dref/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTATTGATGAAA
TNATATCGATAA--

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTATTGATGAAA--
ACATTCATGACACG

slbo/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTATTGATGAAA
-GATTGCNNAA-

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTATTGATGAAA
TGATTGATGA--

MA0377.1_SFL1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTATTGATGAAA-----
TAGAGAATAGAAGAAATAAAA

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTATTGATGAAA
TAATTGATTA--

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTGATGAAA
NAAANTTATTGAANCAN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTATTGATGAAA-
---ATGATGCAAT