Information for motif32


Reverse Opposite:

p-value:1e-14
log p-value:-3.267e+01
Information Content per bp:1.813
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif10.38%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets159.7 +/- 76.6bp
Average Position of motif in Background199.2 +/- 54.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0542.1_ELT-3/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TTTTAGCA
TCTTATCA

gt/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TTTTAGCA
TTTTTA---

CG11617/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TTTTAGCA--
ATTTAACATA

croc/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTTTAGCA
TTTTAT--

Abd-B/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTAGCA
TTTTATGA

PH0068.1_Hoxc13/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAGCA-----
NAATTTTACGAGNTNN

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTTAGCA-----
NNNATTTTACGACNNTN

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAGCA-----
ANATTTTACGAGNNNN

GT1(Trihelix)/Nicotiana tabacum/AthaMap

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAGCA---
TTTTTACCNTNT

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTTAGCA-----
ANNATTTTACGACNTNA