Information for motif9


Reverse Opposite:

p-value:1e-18
log p-value:-4.153e+01
Information Content per bp:1.617
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets163.8 +/- 74.2bp
Average Position of motif in Background219.7 +/- 42.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TTGCTACAAM
TTGCAACATN

Aef1/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTGCTACAAM
---CAACAA-

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTGCTACAAM----
ACTTGCTACCTACACC

MA0365.1_RFX1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTGCTACAAM
GGTTGCCA----

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTGCTACAAM----
ACATGCTACCTAATAC

br-Z2/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTGCTACAAM
TTACTA----

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGCTACAAM--
CAATTGCAAAAATAT

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTGCTACAAM
GATTGCATCA--

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGCTACAAM
SCCTAGCAACAG-

MA0262.1_mab-3/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTGCTACAAM
ANTTCGCAACATT