Information for motif19


Reverse Opposite:

p-value:1e-30
log p-value:-6.939e+01
Information Content per bp:1.620
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets147.3 +/- 85.3bp
Average Position of motif in Background214.7 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:MCTTTCGCGAAM--
--TCTCGCGAGAAT

MA0527.1_ZBTB33/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:MCTTTCGCGAAM----
-CTCTCGCGAGATCTG

MA0401.1_SWI4/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:MCTTTCGCGAAM
--TTTCGCGT--

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-MCTTTCGCGAAM--
GGNTCTCGCGAGAAC

SWI4(MacIsaac)/Yeast

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:MCTTTCGCGAAM
-TTTTCGCGT--

Deaf1/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.71
Offset:3
Orientation:forward strand
Alignment:MCTTTCGCGAAM
---TTCGGG---

MA0185.1_Deaf1/Jaspar

Match Rank:7
Score:0.71
Offset:3
Orientation:forward strand
Alignment:MCTTTCGCGAAM
---TTCGGG---

STB1(MacIsaac)/Yeast

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:MCTTTCGCGAAM
-TTTTCGCG---

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:MCTTTCGCGAAM
--TTTCGCGT--

MA0414.1_XBP1/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:forward strand
Alignment:MCTTTCGCGAAM
---CTCGAGA--