Information for motif40


Reverse Opposite:

p-value:1e-14
log p-value:-3.329e+01
Information Content per bp:1.836
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif9.96%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets146.9 +/- 74.6bp
Average Position of motif in Background194.7 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PL0018.1_hlh-25/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGTGTGTCGA--
AAGGCGCGTGTCCCAG

MA0295.1_FHL1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTGTGTCGA
TTTGCGTC--

twi/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGTGTGTCGA
CATGTGTTG-

MA0414.1_XBP1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGTGTGTCGA-
----NCTCGAG

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGTGTGTCGA
GGACGTGC-----

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGTGTGTCGA--
GGGCCGTGTGCAAAAA

PL0004.1_hlh-27/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGTGTGTCGA--
ATGCGCGTGTCCCAG

Deaf1/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGTGTGTCGA
-GCGATTCGG

MET31(MacIsaac)/Yeast

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGTGTGTCGA
GGTGTGGC--

MA0270.1_AFT2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGTGTGTCGA
GGGGTGTG--