Information for motif35


Reverse Opposite:

p-value:1e-16
log p-value:-3.787e+01
Information Content per bp:1.469
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif10.79%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets180.2 +/- 82.6bp
Average Position of motif in Background86.9 +/- 41.8bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0344.1_NHP10/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGACCGGTGA
--GCCGGGGA

MA0348.1_OAF1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGACCGGTGA--
---TCGGAGATA

MA0354.1_PDR8/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGACCGGTGA-
---ACGGAGAT

MA0432.1_YNR063W/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGACCGGTGA-
---TCGGAGAT

ABI4(2)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGACCGGTGA----
----CGGTGCTTCC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGACCGGTGA
----TGGGGA

ZAP1(WRKY(Zn))/Arabidopsis thaliana/AthaMap

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGACCGGTGA
TTGACCGAG--

MA0320.1_IME1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGACCGGTGA-
---CCGCCGAG

MA0512.1_Rxra/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGACCGGTGA
NCTGACCTTTG-

IME1(MacIsaac)/Yeast

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGACCGGTGA-
---CCGCCGAG