Information for motif44


Reverse Opposite:

p-value:1e-6
log p-value:-1.593e+01
Information Content per bp:1.597
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif38.64%
Number of Background Sequences with motif30.6
Percentage of Background Sequences with motif19.33%
Average Position of motif in Targets178.8 +/- 80.6bp
Average Position of motif in Background151.0 +/- 75.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

sna/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ACAAGTTG
AGCAAGTGG

sna/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--ACAAGTTG
AAGCAAGTGG

sna/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ACAAGTTG
GCAGGTGG

br-Z3/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:ACAAGTTG
ACTAGTTT

sna/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACAAGTTG
ANCAGGTGG

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ACAAGTTG
NNCNNAACAATTNT

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACAAGTTG---
TNCNNAACAATTTTTNC

vnd/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACAAGTTG---
NTGTNAAGTGGNNN

ABF1(bZIP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACAAGTTG-
ACACGTGGC

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ACAAGTTG---
ANTNNTACATGTANNTN