Information for motif11


Reverse Opposite:

p-value:1e-34
log p-value:-7.931e+01
Information Content per bp:1.441
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif8.64%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets147.6 +/- 70.6bp
Average Position of motif in Background110.2 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGCAGCG----
TCNCTTTACAGCGNNNT

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGCAGCG----
TCNNTTTACAGCGNNNT

PDR1/PDR1_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTGCAGCG-
TTATTCGGCGG

PDR1(MacIsaac)/Yeast

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTGCAGCG-
TTATTCGGCGG

MA0541.1_EFL-1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCAGCG----
AATTTCGCGCGNNNN

MA0152.1_NFATC2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTTGCAGCG
TTTTCCA---

MA0355.1_PHD1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTGCAGCG
NGNTGCAGGN

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTTTGCAGCG-
---TGCAGGNA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTGCAGCG
DTTTCCCGCC

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGCAGCG-
ANATTTTTGCAANTN