Information for motif2


Reverse Opposite:

p-value:1e-39
log p-value:-9.062e+01
Information Content per bp:1.522
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.44%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets140.2 +/- 88.9bp
Average Position of motif in Background102.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0374.1_RSC3/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCTCGCGATT
NNGCGCG---

MA0375.1_RSC30/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTCGCGATT
CGCGCGCG---

MA0291.1_DAL82/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCTCGCGATT-
--GCGCACATT

MA0405.1_TEA1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCTCGCGATT
--GCGGACAT

MA0329.1_MBP1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCTCGCGATT
--ACGCGTA-

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTCGCGATT
--GCGCGCTA

MA0557.1_FHY3/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTCGCGATT-
CTCACGCGCTCA

MA0362.1_RDS2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCTCGCGATT
-CTCGGGG--

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCTCGCGATT--
ACCACTCTCGGTCAC

MA0401.1_SWI4/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTCGCGATT
--ACGCGAAA