Information for motif9


Reverse Opposite:

p-value:1e-36
log p-value:-8.503e+01
Information Content per bp:1.660
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif10.48%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets136.6 +/- 73.7bp
Average Position of motif in Background115.2 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Trl/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:ATTCGCTCTC--
--TTGCTCTCTC

MA0205.1_Trl/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:forward strand
Alignment:ATTCGCTCTC--
--TTGCTCTCTC

SeqBias: GA-repeat

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ATTCGCTCTC--
--TCTCTCTCTC

Trl/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTCGCTCTC---
TTNCTCTCTCTCT

MA0051.1_IRF2/Jaspar

Match Rank:5
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------ATTCGCTCTC-
GTTTTGCTTTCACTTTCC

Trl/dmmpmm(Down)/fly

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATTCGCTCTC----
--GCTCTCTCTCTC

GAGA-repeat/Arabidopsis-Promoters/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATTCGCTCTC-
-CTCTCTCTCY

MAC1/Literature(Harbison)/Yeast

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTCGCTCTC
-TTTGCTC--

MA0397.1_STP4/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATTCGCTCTC
-TGCGCTATC

z/dmmpmm(Down)/fly

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATTCGCTCTC
---CACTCA-