Information for motif27


Reverse Opposite:

p-value:1e-12
log p-value:-2.974e+01
Information Content per bp:1.713
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets173.9 +/- 86.3bp
Average Position of motif in Background179.7 +/- 78.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TaMYB80(MYB)/Triticum aestivum/AthaMap

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCGGCTATTC--
-NGGATATTCCC

MA0101.1_REL/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCGGCTATTC-
-GGGGATTTCC

dl-A/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCGGCTATTC--
-GGGTTTTTCCN

dl/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCGGCTATTC--
--GGATTTTCCC

MA0023.1_dl_2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCGGCTATTC-
-GGGGATTTCC

dl/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCGGCTATTC----
--GGGTTTTCCCNG

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCGGCTATTC-
-GGGGATTTCC

Deaf1/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCGGCTATTC--
---GCGATTCGG

MA0273.1_ARO80/Jaspar

Match Rank:9
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------TCGGCTATTC---
GATAATTCTCGGCAAGTATGT

Ik-1

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCGGCTATTC------
---GGTATTCCCAANN