Information for motif22


Reverse Opposite:

p-value:1e-22
log p-value:-5.165e+01
Information Content per bp:1.553
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif10.37%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets126.8 +/- 83.7bp
Average Position of motif in Background116.5 +/- 68.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

UME6(MacIsaac)/Yeast

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGTCGGCGACAA
--TCGGCGGCTA

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGTCGGCGACAA
--TCGGCGGCTA

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGTCGGCGACAA----
CCTTCGGCGCCAAAAGG

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGTCGGCGACAA
--GCGGCGACA-

MA0535.1_Mad/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGTCGGCGACAA
CNGCGNCGGCGCCNG

PB0131.1_Gmeb1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGTCGGCGACAA
TNAACGACGTCGNCCA

Mad/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTCGGCGACAA
GCGNCGCCNG---

PB0179.1_Sp100_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGTCGGCGACAA-
TCCGTCGCTTAAAAG

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGTCGGCGACAA
-GGCGGCG----

MA0412.1_UME6/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGTCGGCGACAA---
--TCGGCGGCTAATT