Information for motif4


Reverse Opposite:

p-value:1e-43
log p-value:-1.004e+02
Information Content per bp:1.615
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif8.09%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets151.6 +/- 75.6bp
Average Position of motif in Background171.7 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTGCGAGGTGC
GCGGCGACA---

CHA4(MacIsaac)/Yeast

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCTGCGAGGTGC
--TGCGATGAG-

SUT1?/SacCer-Promoters/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCTGCGAGGTGC
---GCGCGGGG-

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTGCGAGGTGC--
GCCGCGCAGTGCGT

XBP1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTGCGAGGTGC
-CTTCGAG----

TOD6?/SacCer-Promoters/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTGCGAGGTGC-
---GCGATGAGMT

Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTGCGAGGTGC-
---CCCACGTGCT

MA0351.1_DOT6/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCGAGGTGC-------
ANGANGCGATGAGGTGCNNNN

byn/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCTGCGAGGTGC--
------ANGTGCGA

byn/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCTGCGAGGTGC--
------AAGTGCGA