| p-value: | 1e-17 |
| log p-value: | -3.995e+01 |
| Information Content per bp: | 1.692 |
| Number of Target Sequences with motif | 33.0 |
| Percentage of Target Sequences with motif | 25.00% |
| Number of Background Sequences with motif | 6.7 |
| Percentage of Background Sequences with motif | 4.21% |
| Average Position of motif in Targets | 126.2 +/- 83.7bp |
| Average Position of motif in Background | 111.9 +/- 63.9bp |
| Strand Bias (log2 ratio + to - strand density) | 0.5 |
| Multiplicity (# of sites on avg that occur together) | 1.06 |
| Motif File: | file (matrix) reverse opposite |
| PDF Format Logos: | forward logo reverse opposite |
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 1 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTTTTVTWTC NTTTTATGAC |
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croc/dmmpmm(Bergman)/fly
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTTTTVTWTC -TTTTAT--- |
|

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PH0046.1_Hoxa10/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTTTTVTWTC--- TNAATTTTATTACCTN |
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|
hb/dmmpmm(Noyes)/fly
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTTTTVTWTC- TGTTTTTTTNGT |
|

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|
PH0013.1_Cdx2/Jaspar
| Match Rank: | 5 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTTTTVTWTC---- NAATTTTATTACCNNN |
|

|
|
MA0465.1_CDX2/Jaspar
| Match Rank: | 6 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTTTTVTWTC-- -TTTTATGGCTN |
|

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|
Abd-B/dmmpmm(Noyes_hd)/fly
| Match Rank: | 7 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTTTTVTWTC GTTTTATGAC |
|

|
|
PH0012.1_Cdx1/Jaspar
| Match Rank: | 8 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTTTTVTWTC---- NAATTTTATTACCTNN |
|

|
|
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 9 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTTTTVTWTC--- NGANTTTTATGGCTCN |
|

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|
abd-B/dmmpmm(Noyes)/fly
| Match Rank: | 10 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTTTTVTWTC GTTTTATGA- |
|

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