Information for motif12


Reverse Opposite:

p-value:1e-28
log p-value:-6.648e+01
Information Content per bp:1.908
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif17.84%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif2.01%
Average Position of motif in Targets139.6 +/- 87.1bp
Average Position of motif in Background136.8 +/- 88.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0329.1_MBP1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAATCGCG-
--NNCGCGT

MA0374.1_RSC3/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GAATCGCG---
----CGCGCGG

Deaf1/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAATCGCG
CCGAAGCGC-

MA0401.1_SWI4/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAATCGCG-
-TTTCGCGT

pho/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAATCGCG
-AATGGC-

MA0330.1_MBP1::SWI6/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAATCGCG-
--AACGCGT

Deaf1/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAATCGCG
CCGAAGCGCT

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAATCGCG-----
ACCACTCTCGGTCAC

OPI1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAATCGCG
TCGAACC---

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAATCGCG-
-TAGCGCGC