Information for motif21


Reverse Opposite:

p-value:1e-22
log p-value:-5.165e+01
Information Content per bp:1.664
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif10.37%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets151.9 +/- 78.6bp
Average Position of motif in Background275.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DAL82(MacIsaac)/Yeast

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GAAATTCGCG-
-AAANTTGCGC

MA0401.1_SWI4/Jaspar

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GAAATTCGCG-
---TTTCGCGT

MA0329.1_MBP1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GAAATTCGCG-
----NNCGCGT

MA0541.1_EFL-1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAAATTCGCG------
-AATTTCGCGCGNNNN

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAAATTCGCG
GGAAATTCCC-

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:6
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GAAATTCGCG---
---TTTCGCGTTT

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAAATTCGCG-
---TTTCGCGT

MA0374.1_RSC3/Jaspar

Match Rank:8
Score:0.67
Offset:6
Orientation:forward strand
Alignment:GAAATTCGCG---
------CGCGCGG

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GAAATTCGCG--
---TTTCGCGTC

PB0136.1_IRC900814_2/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAAATTCGCG---
ATGGAAAGTCGTAAAA