Information for motif11


Reverse Opposite:

p-value:1e-28
log p-value:-6.529e+01
Information Content per bp:1.674
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif14.74%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets136.3 +/- 78.1bp
Average Position of motif in Background145.6 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NDD1(MacIsaac)/Yeast

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAAACGGGAGAA
-AAAGGGGAAA-

Kr/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAAACGGGAGAA
--AACGGGTTAA

RLR1?/SacCer-Promoters/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAAACGGGAGAA-
-AAAARRGAAAAW

MA0437.1_YPR196W/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAAACGGGAGAA-
----CGGAGAAAT

STB1(MacIsaac)/Yeast

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAAACGGGAGAA
----CGCGAAAA

MA0537.1_BLMP-1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAACGGGAGAA
-AAAAGTGAAAA

MA0045.1_HMG-I/Y/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAACGGGAGAA-
CAACAAATGGAAAAAC

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAACGGGAGAA
-AAACGCGAAA-

MA0260.1_che-1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAACGGGAGAA
GAAACC------

MA0260.1_che-1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAACGGGAGAA
GAAACC------