Information for motif46


Reverse Opposite:

p-value:1e-4
log p-value:-1.048e+01
Information Content per bp:1.793
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif10.37%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif4.66%
Average Position of motif in Targets163.5 +/- 88.2bp
Average Position of motif in Background190.2 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0027.1_En1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGTAGTGG--
AAGTAGTGCCC

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AGTAGTGG
GGTAAGTA----

Aef1/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGTAGTGG
TGTTGTTG

MA0454.1_odd/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGTAGTGG
AACAGTAGCAG

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AGTAGTGG--
NNNTTAGGTAGCNTNT

SMP1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------AGTAGTGG
CTAAAAATAGTAGT--

SMP1(MacIsaac)/Yeast

Match Rank:7
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------AGTAGTGG
CTAAAAATAGTAGT--

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AGTAGTGG--
NNTGTAGGTAGCANNT

odd/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTAGTGG
AACAGTAGCA-

br-Z2/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGTAGTGG
TAAATAG---