Information for motif18


Reverse Opposite:

p-value:1e-31
log p-value:-7.237e+01
Information Content per bp:1.720
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif6.43%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets154.0 +/- 86.7bp
Average Position of motif in Background147.2 +/- 101.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCGCTTCT
--GCTTCC

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGCTTCT
TGTCGGTT--

byn/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTTCT
TCGCACTT--

SWI6(MacIsaac)/Yeast

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCGCTTCT
-CGCGTC-

MA0291.1_DAL82/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGCTTCT-
GCGCACATT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGCTTCT
GGCVGTTR-

MA0121.1_ARR10/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGCTTCT
GCGGATCT

MA0260.1_che-1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGCTTCT
-GGTTTC-

MA0260.1_che-1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGCTTCT
-GGTTTC-

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCGCTTCT--
NNGCACCTTTCTCC