Information for motif19


Reverse Opposite:

p-value:1e-19
log p-value:-4.406e+01
Information Content per bp:1.721
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif14.62%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif1.96%
Average Position of motif in Targets155.8 +/- 98.5bp
Average Position of motif in Background145.6 +/- 45.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

dsx/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----ACATTTTCTT--
NNGNTACATTGTNTTAN

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACATTTTCTT-----
NTNAATTTTATTGNATT

RLR1/RLR1_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACATTTTCTT----
--ATTTTCTTCTTT

twi/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACATTTTCTT
CACATGT----

UME1/UME1_YPD/[](Harbison)/Yeast

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACATTTTCTT
TACNTTTCCTT

MA0515.1_Sox6/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACATTTTCTT
CCATTGTTTT

GAT3(MacIsaac)/Yeast

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACATTTTCTT
-CATGTTAT-

MA0078.1_Sox17/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACATTTTCTT
CTCATTGTC--

CST6(MacIsaac)/Yeast

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACATTTTCTT
TGCATTTN---

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACATTTTCTT-
ANTNNTACATGTANNTN