Information for motif13


Reverse Opposite:

p-value:1e-31
log p-value:-7.191e+01
Information Content per bp:1.799
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif5.48%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets141.7 +/- 82.5bp
Average Position of motif in Background140.1 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0266.1_ABF2/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:ACTCTAGC-
--TCTAGAN

MA0396.1_STP3/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACTCTAGC---
--GCTAGCGCA

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACTCTAGC----
ATGTACAGTAGCAAAG

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACTCTAGC----
ATTTACAGTAGCAAAA

MA0454.1_odd/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACTCTAGC--
AACAGTAGCAG

MA0397.1_STP4/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACTCTAGC---
--GATAGCGCA

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTCTAGC
RSCACTYRAG-

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTCTAGC----
NNAATTCTCGNTNAN

br-Z2/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACTCTAGC--
--TCTATTAA

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTCTAGC-------
NNGATCTAGAACCTNNN