Information for motif3


Reverse Opposite:

p-value:1e-32
log p-value:-7.563e+01
Information Content per bp:1.673
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif17.92%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets150.7 +/- 79.5bp
Average Position of motif in Background236.6 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0589.1_ZAP1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TTGACCGATC-
TTGACCGAGCC

ZAP1(WRKY(Zn))/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TTGACCGATC
TTGACCGAG-

MA0070.1_PBX1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTGACCGATC-
TTTGATTGATGN

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCGATC---
GGATTGACAGGTCNTT

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCGATC---
NTATTGACAGCTNNTT

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCGATC---
NTATTGACAGGTNNTN

ZmHOX2a(2)(HD-HOX)/Zea mays/AthaMap

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTGACCGATC-
----CAGATCA

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCGATC---
GTATTGACAGCTNNTT

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCGATC---
GTATTGACAGGTNNTT

MA0408.1_TOS8/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGACCGATC
TTTGACAG---