Information for motif30


Reverse Opposite:

p-value:1e-15
log p-value:-3.512e+01
Information Content per bp:1.696
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif8.49%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets170.8 +/- 82.9bp
Average Position of motif in Background87.9 +/- 41.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAGTACTATAYT----
TAAGATTATAATACGG

MA0379.1_SIG1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TAGTACTATAYT
------TATAT-

MA0346.1_NHP6B/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGTACTATAYT------
TTTATTTATATATAATATGA

MA0386.1_TBP/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAGTACTATAYT------
GACTAGATATATATATTCGAT

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAGTACTATAYT----
NANTTATATATAANGN

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TAGTACTATAYT-
TTTTAAGTACTTAAATT

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGTACTATAYT----
NANTATTATAATTNNN

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TAGTACTATAYT-
-----TTATACNC

MA0345.1_NHP6A/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAGTACTATAYT------
NNATNNTTATATATAGNNNAN

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TAGTACTATAYT-
TACTAAGTACTTAAATG