Information for motif45


Reverse Opposite:

p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.919
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif6.64%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets128.2 +/- 66.4bp
Average Position of motif in Background216.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0078.1_Sox17/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGACATTGTCGA
-CTCATTGTC--

dsx/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGACATTGTCGA--
NNGNTACATTGTNTTAN

MA0442.1_SOX10/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGACATTGTCGA
---CTTTGT---

BEAF-32B/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGACATTGTCGA
ACGATACT-----

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGACATTGTCGA
NNNNATGACCTTGANTN

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGACATTGTCGA--
TGTTCCCATTGTGTACT

dsx-F/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGACATTGTCGA
TNATNACTTTGTAG-

dsx-M/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGACATTGTCGA
TNATNACTTTGTAG-

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGACATTGTCGA--
NNNCCATTGTGTNAN

pho/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGACATTGTCGA
-GCCATT-----