Information for motif6


Reverse Opposite:

p-value:1e-32
log p-value:-7.416e+01
Information Content per bp:1.749
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif16.60%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets153.2 +/- 87.4bp
Average Position of motif in Background121.8 +/- 48.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Dref/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CGATCGTTATTT
CTATCGATAT--

Dref/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CGATCGTTATTT
CTATCGATAT--

Dref/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGATCGTTATTT
TTATCGATAAAA

DREF/Drosophila-Promoters/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGATCGTTATTT
HTATCGATARBT

MA0529.1_BEAF-32/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGATCGTTATTT----
-TATCGATAGTTTNNN

MA0536.1_pnr/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGATCGTTATTT
ANCTATCGATA---

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGATCGTTATTT
DGATCRATAN--

Dref/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGATCGTTATTT
-TATCGATA---

BEAF-32/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGATCGTTATTT
-TATCGATA---

PH0044.1_Homez/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGATCGTTATTT--
AAAACATCGTTTTTAAG