Information for motif42


Reverse Opposite:

p-value:1e-10
log p-value:-2.429e+01
Information Content per bp:1.672
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif6.60%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets181.3 +/- 94.9bp
Average Position of motif in Background179.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

vvl/dmmpmm(Down)/fly

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:ATCGTGTTAATA
----TTTTAATA

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----ATCGTGTTAATA
AAAACATCGTTTTTAAG

prd/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATCGTGTTAATA
---GTGATAAT-

Kr/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATCGTGTTAATA
AACGGGTTAA--

prd/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATCGTGTTAATA
---GTGATAATN

ftz/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATCGTGTTAATA--
----TGTTAATGAN

Caup/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATCGTGTTAATA
--NNTGTTATTG

ftz/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATCGTGTTAATA-
----TGTTAATGA

PHO2(MacIsaac)/Yeast

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ATCGTGTTAATA
-----CTTAAT-

MA0151.1_ARID3A/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ATCGTGTTAATA
-----TTTAAT-