Information for motif37


Reverse Opposite:

p-value:1e-14
log p-value:-3.440e+01
Information Content per bp:1.792
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif14.21%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets157.4 +/- 89.7bp
Average Position of motif in Background163.6 +/- 50.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0282.1_CEP3/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATTTGCGAMT
-TTTCCGAG-

MA0391.1_STB4/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ATTTGCGAMT
--TTCCGAG-

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCGAMT---
NNNATTTTACGACNNTN

PH0066.1_Hoxc11/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCGAMT---
NNNTTTTACGACNTTN

MA0438.1_YRM1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTTGCGAMT
ATTTCCGT--

PH0065.1_Hoxc10/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCGAMT---
ANNTTTTACGACNTNN

MA0432.1_YNR063W/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTTGCGAMT
ATCTCCGA--

PH0047.1_Hoxa11/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCGAMT---
NNGTTTTACGACTTTA

PH0067.1_Hoxc12/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCGAMT---
GNNNTTTTACGACCTNA

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCGAMT---
ANNATTTTACGACNTNA