Information for motif20


Reverse Opposite:

p-value:1e-22
log p-value:-5.258e+01
Information Content per bp:1.622
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif13.28%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets177.4 +/- 78.8bp
Average Position of motif in Background123.1 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

zen/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGAATAAAGCCG
--AATAAA----

MA0020.1_Dof2/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CGAATAAAGCCG
-----AAAGCA-

MA0053.1_MNB1A/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CGAATAAAGCCG
-----AAAGC--

STB5(MacIsaac)/Yeast

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGAATAAAGCCG
--TATAACACCG

MA0392.1_STB5/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CGAATAAAGCCG
----TAACNCCG

STB5/STB5_YPD/[](Harbison)/Yeast

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGAATAAAGCCG
--TATAACACCG

MA0064.1_PBF/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CGAATAAAGCCG
-----AAAGC--

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGAATAAAGCCG
-AAATAAAGCAA

MA0021.1_Dof3/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CGAATAAAGCCG
-----AAAGCG-

cad/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGAATAAAGCCG
NTAATAAA----