Information for motif31


Reverse Opposite:

p-value:1e-24
log p-value:-5.631e+01
Information Content per bp:1.657
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif6.92%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets144.2 +/- 73.9bp
Average Position of motif in Background176.4 +/- 117.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ABI4(2)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGCACCGCGT
GGNNGCACCG---

SUT1(MacIsaac)/Yeast

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CGCACCGCGT
--CCCCGCG-

PHO2/PHO2_H2O2Hi/[](Harbison)/Yeast

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGCACCGCGT-
CGCACCGCACG

MA0399.1_SUT1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGCACCGCGT
--CCCCGCG-

Run/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGCACCGCGT
--CACCGCC-

SWI6(MacIsaac)/Yeast

Match Rank:6
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CGCACCGCGT-
-----CGCGTC

MA0374.1_RSC3/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CGCACCGCGT--
-----CGCGCGG

MA0329.1_MBP1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGCACCGCGT
---NNCGCGT

MA0330.1_MBP1::SWI6/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGCACCGCGT
---AACGCGT

SUT1?/SacCer-Promoters/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCACCGCGT
--CCCCGCGC