Information for motif6


Reverse Opposite:

p-value:1e-19
log p-value:-4.480e+01
Information Content per bp:1.787
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif14.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets179.5 +/- 87.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0408.1_TOS8/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GTCAATCC
CTGTCAAA--

MA0434.1_YPR013C/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTCAATCC
TGTAGATCA

Ptx1/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTCAATCC-
NGTTAATCCC

MA0435.1_YPR015C/Jaspar

Match Rank:4
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------GTCAATCC-----
TGAAGACGTAAATCCTTACA

ASH1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTCAATCC
AGTCAA---

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTCAATCC------
ATAGTTAATCCCCCNNA

bcd/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTCAATCC-
GGTTAATCCN

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTCAATCC------
NTTGTTAATCCCTCTNN

MA0201.1_Ptx1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTCAATCC
-TTAATCC

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTCAATCC-
NCTGTCAATCAN