Information for motif27


Reverse Opposite:

p-value:1e-17
log p-value:-3.993e+01
Information Content per bp:1.912
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif11.79%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets151.1 +/- 82.8bp
Average Position of motif in Background136.5 +/- 50.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:TCGGGTGC
--GGGTGC

AFT2(MacIsaac)/Yeast

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TCGGGTGC-
--GGGTGCA

RCS1(MacIsaac)/Yeast

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TCGGGTGC-
--GGGTGCA

MA0544.1_GEI-11/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TCGGGTGC-
GTGTCGGCCGCT

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:5
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TCGGGTGC---
--GGGTGCANT

MA0362.1_RDS2/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCGGGTGC
CTCGGGG--

MA0269.1_AFT1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TCGGGTGC---------
CNANNCGGGTGCAATATNNNA

MA0404.1_TBS1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCGGGTGC-
-CGGATCCG

MA0270.1_AFT2/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCGGGTGC-
-GGGGTGTG

Deaf1/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCGGGTGC
TTCGGG---