Information for motif35


Reverse Opposite:

p-value:1e-11
log p-value:-2.620e+01
Information Content per bp:1.699
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif9.85%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets159.7 +/- 88.0bp
Average Position of motif in Background176.0 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br-Z3/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GACTAGGTTG
-ACTAGTTT-

MA0468.1_DUX4/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACTAGGTTG
TGATTAAATTA

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GACTAGGTTG-
NNAGGGACAAGGGCNC

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GACTAGGTTG-
----GTGTTGN

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACTAGGTTG-----
CTACTAGGATGTNNTN

GAMYB(MYB)/Hordeum vulgare/AthaMap

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GACTAGGTTG
--GGCGGTTG

P(MYB)/Zea mays/AthaMap

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GACTAGGTTG--
---CNGGTAGGT

MA0365.1_RFX1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GACTAGGTTG---
-----GGTTGCCA

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GACTAGGTTG----
TCGCGAAGGTTGTACT

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GACTAGGTTG
NNNNGTTGATTGGGTCG