Information for motif21


Reverse Opposite:

p-value:1e-28
log p-value:-6.658e+01
Information Content per bp:1.684
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif7.72%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets152.1 +/- 87.9bp
Average Position of motif in Background58.9 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PHO2/PHO2_H2O2Hi/[](Harbison)/Yeast

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGGCGAACGKCT
CGCACCGCACG---

Deaf1/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGCGAACGKCT
CCGAAGCGC----

PB0179.1_Sp100_2/Jaspar

Match Rank:3
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------CGGCGAACGKCT
NNTTTANNCGACGNA-----

MA0261.1_lin-14/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGGCGAACGKCT
----GAACAC--

MA0261.1_lin-14/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGGCGAACGKCT
----GAACAC--

MA0432.1_YNR063W/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGCGAACGKCT
TCGGAGAT-----

MA0131.1_HINFP/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGGCGAACGKCT
--GCGGACGTTN

YDR520C(MacIsaac)/Yeast

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGGCGAACGKCT
TCTCCGGCGGA-----

MA0354.1_PDR8/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGGCGAACGKCT
ACGGAGAT-----

MA0394.1_STP1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGCGAACGKCT
TGCGGCGC------