Information for motif11


Reverse Opposite:

p-value:1e-29
log p-value:-6.711e+01
Information Content per bp:1.484
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif12.45%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets138.5 +/- 84.0bp
Average Position of motif in Background174.0 +/- 50.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GATWATTHAW
AATTATT---

abd-A/dmmpmm(Down)/fly

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GATWATTHAW
-ATAAAT---

ap/dmmpmm(Down)/fly

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GATWATTHAW
TATTATT---

Antp/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GATWATTHAW
-ATAATT---

ap/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GATWATTHAW
-ATNATT---

Antp/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GATWATTHAW
-ATAATT---

MA0008.1_HAT5/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GATWATTHAW
CAATTATT---

Antp/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GATWATTHAW
AATAAT----

abd-A/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GATWATTHAW
-ATAATT---

MA0183.1_CG7056/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GATWATTHAW
--TAATTAAA