Information for motif37


Reverse Opposite:

p-value:1e-18
log p-value:-4.330e+01
Information Content per bp:1.447
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.86%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets124.9 +/- 66.5bp
Average Position of motif in Background89.7 +/- 67.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

UME6(MacIsaac)/Yeast

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTGCCGACGA
TAGCCGCCGA

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTGCCGACGA
TAGCCGCCGA

IME1(MacIsaac)/Yeast

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTGCCGACGA-
---CCGCCGAG

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGCCGACGA-
NNTTTANNCGACGNA

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGCCGACGA---
NNTTTGCACACGGCCC

MA0412.1_UME6/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGCCGACGA
AATTAGCCGCCGA

MA0320.1_IME1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTGCCGACGA-
---CCGCCGAG

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTGCCGACGA---
AAATTTGCTGACTTAGA

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGCCGACGA---
NNNNTTGGCGCCGANNN

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGCCGACGA
-CGCCGCC--