Information for motif17


Reverse Opposite:

p-value:1e-23
log p-value:-5.488e+01
Information Content per bp:1.701
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif16.32%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets166.8 +/- 65.0bp
Average Position of motif in Background158.6 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ATCCTCGTGATC
GATAACATCCTAGTAG--

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCCTCGTGATC
ACATCCTGNT----

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATCCTCGTGATC-
NTTATTCGTCATNC

XBP1(MacIsaac)/Yeast

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATCCTCGTGATC
-TCCTCGAG---

ttk/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATCCTCGTGATC
GGTCCTGCC----

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATCCTCGTGATC
GTCCTAA-----

MA0553.1_SMZ/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATCCTCGTGATC
--CCTCGTAC--

ttk/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------ATCCTCGTGATC
TTNGATTATCCTTG-----

MA0460.1_ttk/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATCCTCGTGATC
ATTATCCTT------

MA0044.1_HMG-1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATCCTCGTGATC
---GTTGTACTC