Information for motif36


Reverse Opposite:

p-value:1e-11
log p-value:-2.620e+01
Information Content per bp:1.663
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif9.85%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets164.1 +/- 97.2bp
Average Position of motif in Background181.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

brk/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GTCAASCKGCGC-
-----CTGGCGCC

MA0213.1_brk/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GTCAASCKGCGC-
-----CTGGCGCC

brk/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GTCAASCKGCGC-
-----CCGGCGCC

brk/dmmpmm(Down)/fly

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTCAASCKGCGC-
-----CCGGCGCT

MA0395.1_STP2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCAASCKGCGC------
NNGNNGTGCGGCGCCGNTNN

brk/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GTCAASCKGCGC-
-----CTGGCGCC

STP1(MacIsaac)/Yeast

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTCAASCKGCGC
----TGCGGCGC

MA0394.1_STP1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTCAASCKGCGC
----TGCGGCGC

brk/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GTCAASCKGCGC-
------CGGCGCC

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCAASCKGCGC--
NNTCCTGCTGTGNNN