Information for motif29


Reverse Opposite:

p-value:1e-16
log p-value:-3.747e+01
Information Content per bp:1.846
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif11.32%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.59%
Average Position of motif in Targets169.1 +/- 86.4bp
Average Position of motif in Background176.0 +/- 73.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI6(MacIsaac)/Yeast

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CGAGTCGC
CGCGTC--

MBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CGAGTCGC
ACGCGTC--

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGAGTCGC
ACGCGTC--

MA0330.1_MBP1::SWI6/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGAGTCGC
ACGCGTT--

ARG80(MacIsaac)/Yeast

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGAGTCGC
-GCGTCT-

MA0271.1_ARG80/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGAGTCGC
-GCGTCT-

PB0179.1_Sp100_2/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGAGTCGC-------
TCCGTCGCTTAAAAG

MA0329.1_MBP1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGAGTCGC
NNCGCGT---

Deaf1/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGAGTCGC
CCGAAGCGC

MA0394.1_STP1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGAGTCGC-
-GCGCCGCA