Information for motif37


Reverse Opposite:

p-value:1e-11
log p-value:-2.674e+01
Information Content per bp:1.544
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif18.40%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif5.27%
Average Position of motif in Targets183.3 +/- 79.9bp
Average Position of motif in Background120.5 +/- 83.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGTTGGGTGT---
---TGGGTGTGGC

MA0493.1_Klf1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CGTTGGGTGT----
---TGGGTGTGGCN

MA0270.1_AFT2/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGTTGGGTGT-
---GGGGTGTG

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGTTGGGTGT----
--NTGGGTGTGGCC

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGTTGGGTGT
----GGGTGC

MA0133.1_BRCA1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGGGTGT
GTGTTGN----

MA0313.1_HAP2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGTTGGGTGT
--TTGGT---

SeqBias: CA-repeat

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGTTGGGTGT---
---TGTGTGTGTG

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGGGTGT------
NNNTNGGGCGTATNNTN

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGTTGGGTGT
CCTTTGAWGT