Information for motif26


Reverse Opposite:

p-value:1e-19
log p-value:-4.505e+01
Information Content per bp:1.721
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif12.03%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets157.7 +/- 84.6bp
Average Position of motif in Background131.0 +/- 66.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

usp/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.84
Offset:2
Orientation:forward strand
Alignment:ATGGGGTCAC-
--GGGGTCACG

MA0016.1_usp/Jaspar

Match Rank:2
Score:0.83
Offset:2
Orientation:forward strand
Alignment:ATGGGGTCAC--
--GGGGTCACGG

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---ATGGGGTCAC----
NTNNNGGGGTCANGNNN

RTG3/Literature(Harbison)/Yeast

Match Rank:4
Score:0.79
Offset:4
Orientation:forward strand
Alignment:ATGGGGTCAC
----GGTCAC

Hr46/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.76
Offset:3
Orientation:forward strand
Alignment:ATGGGGTCAC
---GGGTCA-

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---ATGGGGTCAC---
CGCGCCGGGTCACGTA

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ATGGGGTCAC---
AGAGCGGGGTCAAGTA

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATGGGGTCAC
ATGGGGTGAT

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATGGGGTCAC----
GGCGAGGGGTCAAGGGC

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATGGGGTCAC----
CTCCAGGGGTCAATTGA