Information for motif17


Reverse Opposite:

p-value:1e-16
log p-value:-3.833e+01
Information Content per bp:1.637
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif12.88%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets123.3 +/- 69.9bp
Average Position of motif in Background185.7 +/- 68.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

abd-A/dmmpmm(Down)/fly

Match Rank:1
Score:0.76
Offset:5
Orientation:forward strand
Alignment:ATTTCATTTATA
-----ATTTAT-

abd-A/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:ATTTCATTTATA
-----AATTAT-

MA0485.1_Hoxc9/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ATTTCATTTATA---
--NTGATTTATGGCC

TBP(- other)/several species/AthaMap

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ATTTCATTTATA--
--GGTATTTATAGN

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:ATTTCATTTATA---
---TGATTTATGGCC

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATTTCATTTATA----
TCTTTATATATAAATA

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ATTTCATTTATA-
NNNNNNCTTTTATAN

MA0108.2_TBP/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ATTTCATTTATA-
NNNNNNCTTTTATAN

TATA-box/SacCer-Promoters/Homer

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATTTCATTTATA
--BBHWTATATA

SeqBias: TA-repeat

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATTTCATTTATA
--TATATATATA