Information for motif8


Reverse Opposite:

p-value:1e-32
log p-value:-7.496e+01
Information Content per bp:1.881
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif5.64%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets150.7 +/- 79.3bp
Average Position of motif in Background146.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAGCGACGAGCC
CAGCCAC-----

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGCGACGAGCC
CAGCC-------

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGACGAGCC
GCGGCGACA----

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGACGAGCC
CACAGN--------

SWI5/Literature(Harbison)/Yeast

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGACGAGCC
CCAGCA-------

TOD6?/SacCer-Promoters/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGCGACGAGCC
--GCGATGAGMT

MA0267.1_ACE2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGCGACGAGCC
ACCAGCA-------

CHA4(MacIsaac)/Yeast

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGCGACGAGCC
-TGCGATGAG--

MA0048.1_NHLH1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGACGAGCC
NCGCAGCTGCGN---

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCGACGAGCC
NNTTTANNCGACGNA--