Information for motif24


Reverse Opposite:

p-value:1e-18
log p-value:-4.329e+01
Information Content per bp:1.697
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif11.05%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets138.0 +/- 91.7bp
Average Position of motif in Background144.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTCBCGKCGA
TTTCGCGTC--

MA0401.1_SWI4/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTCBCGKCGA
TTTCGCGT---

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTCBCGKCGA
TTTCGCGTTT-

SWI4(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTCBCGKCGA
TTTTCGCGT---

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTCBCGKCGA
TTTCGCGT---

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTCBCGKCGA
VDTTTCCCGCCA-

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTCBCGKCGA-
AGTATTCTCGGTTGC

STB1(MacIsaac)/Yeast

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTCBCGKCGA
TTTTCGCG----

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTCBCGKCGA
TTCCCGCCWG

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTCBCGKCGA-
NNAATTCTCGNTNAN