Information for motif21


Reverse Opposite:

p-value:1e-27
log p-value:-6.296e+01
Information Content per bp:1.659
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.99%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets135.5 +/- 83.4bp
Average Position of motif in Background242.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0391.1_STB4/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCCGAGCGAT
TTCCGAG----

MA0282.1_CEP3/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCCGAGCGAT
TTTCCGAG----

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCCGAGCGAT
TCGGNNCGA-

STB4(MacIsaac)/Yeast

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCCGAGCGAT
TCGGNNCGA-

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCGAGCGAT--
--DGATCRATAN

MA0311.1_HAL9/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCGAGCGAT
TTCCG------

MA0432.1_YNR063W/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCGAGCGAT
ATCTCCGA-----

z/dmmpmm(Down)/fly

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCGAGCGAT
--TGAGTG--

z/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCCGAGCGAT
--TGAGTG--

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCCGAGCGAT
-CGGAGC---