Information for motif5


Reverse Opposite:

p-value:1e-36
log p-value:-8.427e+01
Information Content per bp:1.732
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif6.12%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets148.1 +/- 86.9bp
Average Position of motif in Background147.2 +/- 76.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0261.1_lin-14/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TCTCGTGTTCAT
----GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TCTCGTGTTCAT
----GTGTTC--

TYE7(MacIsaac)/Yeast

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCTCGTGTTCAT
GTCACGTG-----

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTCGTGTTCAT
TCACGTG-----

MA0409.1_TYE7/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCTCGTGTTCAT
TCACGTG-----

vvl/dmmpmm(Down)/fly

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCTCGTGTTCAT-
-----TTTTAATA

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCTCGTGTTCAT---
GGGCCGTGTGCAAAAA

MA0281.1_CBF1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCTCGTGTTCAT
TCACGTGC----

MA0330.1_MBP1::SWI6/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCTCGTGTTCAT
--ACGCGTT---

CBF1(MacIsaac)/Yeast

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTCGTGTTCAT
GTCACGTG-----