Information for motif33


Reverse Opposite:

p-value:1e-12
log p-value:-2.856e+01
Information Content per bp:1.711
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif17.42%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif2.86%
Average Position of motif in Targets145.8 +/- 87.6bp
Average Position of motif in Background151.8 +/- 106.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRG1(MacIsaac)/Yeast

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGTCCAGAA
AGGGTCC----

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGTCCAGAA
AGGGTCC----

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGTCCAGAA------
NNGATCTAGAACCTNNN

SKN7(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGTCCAGAA
-GGCCCGGA-

MA0587.1_TCP16/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGGTCCAGAA
CCGGGTCCAC--

MA0266.1_ABF2/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGGTCCAGAA
--CTCTAGA-

MA0347.1_NRG1/Jaspar

Match Rank:7
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------GGGTCCAGAA--
CTAGATCAGGGTCCATCGCA

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GGGTCCAGAA-
CTCCAGGGGTCAATTGA

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GGGTCCAGAA
AGAGCGGGGTCAAGTA

Hr46/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGTCCAGAA
GGGTCA----