Information for motif34


Reverse Opposite:

p-value:1e-20
log p-value:-4.764e+01
Information Content per bp:1.661
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif5.31%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets142.4 +/- 87.7bp
Average Position of motif in Background237.5 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0344.1_NHP10/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TCCACGGCGC
TCCCCGGC--

MA0394.1_STP1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TCCACGGCGC
--TGCGGCGC

STP1(MacIsaac)/Yeast

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TCCACGGCGC
--TGCGGCGC

brk/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TCCACGGCGC-
----CGGCGCC

MA0395.1_STP2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TCCACGGCGC------
NNGNNGTGCGGCGCCGNTNN

Med/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCCACGGCGC
ACTGCCAGCCGC

brk/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCCACGGCGC-
---CCGGCGCC

brk/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCCACGGCGC-
---CTGGCGCC

MA0213.1_brk/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCCACGGCGC-
---CTGGCGCC

MA0352.1_PDR1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCCACGGCGC
TCCGCGGA--