Information for motif17


Reverse Opposite:

p-value:1e-25
log p-value:-5.778e+01
Information Content per bp:1.663
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif14.11%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets168.5 +/- 86.1bp
Average Position of motif in Background125.6 +/- 88.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:DGGSYKCY
-GGGTGC-

GCR1(MacIsaac)/Yeast

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:DGGSYKCY-
GGGCTTCCA

AFT2(MacIsaac)/Yeast

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:DGGSYKCY
-GGGTGCA

GCR1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:DGGSYKCY--
-GGCTTCCAC

MA0260.1_che-1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:DGGSYKCY
-GGTTTC-

MA0260.1_che-1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:DGGSYKCY
-GGTTTC-

MA0304.1_GCR1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:DGGSYKCY-
-GGCTTCCA

ROX1(MacIsaac)/Yeast

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--DGGSYKCY
GCGGGCTTNT

RCS1(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:DGGSYKCY
-GGGTGCA

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---DGGSYKCY-----
NNNGGGGCGCCCCCNN