| p-value: | 1e-22 |
| log p-value: | -5.224e+01 |
| Information Content per bp: | 1.739 |
| Number of Target Sequences with motif | 28.0 |
| Percentage of Target Sequences with motif | 5.15% |
| Number of Background Sequences with motif | 1.1 |
| Percentage of Background Sequences with motif | 0.38% |
| Average Position of motif in Targets | 119.7 +/- 68.9bp |
| Average Position of motif in Background | 206.6 +/- 22.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.04 |
| Motif File: | file (matrix) reverse opposite |
| PDF Format Logos: | forward logo reverse opposite |
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATTTGACACGC- NNAATTAGTCACGGT |
|

|
|
MA0222.1_exd/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AATTTGACACGC -TTTTGACA--- |
|

|
|
exd/dmmpmm(Noyes_hd)/fly
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AATTTGACACGC -TTTTGACAAA- |
|

|
|
CG11617/dmmpmm(Noyes_hd)/fly
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AATTTGACACGC -ATTTAACATA- |
|

|
|
MA0408.1_TOS8/Jaspar
| Match Rank: | 5 |
| Score: | 0.69 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AATTTGACACGC --TTTGACAG-- |
|

|
|
Achi/dmmpmm(Noyes_hd)/fly
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AATTTGACACGC -NTTTGACAGC- |
|

|
|
Six4/dmmpmm(Noyes_hd)/fly
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AATTTGACACGC -ATTTGATACC- |
|

|
|
prd/dmmpmm(Noyes)/fly
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AATTTGACACGC- AATCCGTCACGCT |
|

|
|
Vis/dmmpmm(Noyes_hd)/fly
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AATTTGACACGC -ANNTGACAGN- |
|

|
|
MA0006.1_Arnt::Ahr/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 7 |
| Orientation: | reverse strand |
| Alignment: | AATTTGACACGC- -------CACGCA |
|

|
|