Information for motif26


Reverse Opposite:

p-value:1e-23
log p-value:-5.449e+01
Information Content per bp:1.700
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif6.80%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets146.4 +/- 93.4bp
Average Position of motif in Background212.9 +/- 101.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TTTCTGTCTCCG
TCAGTTTCATTTTCC-

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTTCTGTCTCCG
AGTTTCAGTTTC--

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTGTCTCCG
ACTTTCACTTTC--

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTGTCTCCG
RSTTTCRSTTTC--

MA0051.1_IRF2/Jaspar

Match Rank:5
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TTTCTGTCTCCG
GTTTTGCTTTCACTTTCC-

AZF1/AZF1_YPD/1-AZF1(Harbison)/Yeast

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTCTGTCTCCG----
TTTTTCTTTTCCTGTTTC

AZF1(MacIsaac)/Yeast

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTCTGTCTCCG----
TTTTTCTTTTCCTGTTTC

SeqBias: GA-repeat

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTCTGTCTCCG
TCTCTCTCTC--

SUM1/SUM1_YPD/16-SUM1(Harbison)/Yeast

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTCTGTCTCCG
TTTTCTGACGC--

MA0348.1_OAF1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTTCTGTCTCCG-
----TATCTCCGA