Information for motif43


Reverse Opposite:

p-value:1e-10
log p-value:-2.453e+01
Information Content per bp:1.670
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif5.81%
Average Position of motif in Targets151.7 +/- 88.9bp
Average Position of motif in Background132.4 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CTTTATCCAC
----ATCCAC

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTTTATCCAC
--TTTTCCA-

DAL80/Literature(Harbison)/Yeast

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTTATCCAC
--TTATC---

DAL80(MacIsaac)/Yeast

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTTATCCAC
--TTATC---

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTTTATCCAC-
-ATTTTCCATT

TFAM/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTTTATCCAC
--TTATC---

MA0064.1_PBF/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTTTATCCAC
GCTTT------

MA0053.1_MNB1A/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTTTATCCAC
GCTTT------

MA0021.1_Dof3/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTTTATCCAC
CGCTTT------

MA0020.1_Dof2/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTTTATCCAC
NGCTTT------