Information for motif18


Reverse Opposite:

p-value:1e-25
log p-value:-5.771e+01
Information Content per bp:1.851
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif11.20%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets143.3 +/- 96.2bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0375.1_RSC30/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCGGTA
CGCGCGCG---

MA0374.1_RSC3/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCGCGCGGTA
-CGCGCGG--

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCGCGCGGTA
--GCGCGCTA

SUT1(MacIsaac)/Yeast

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCGCGCGGTA
-CGCGGGG--

MA0399.1_SUT1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCGCGCGGTA
-CGCGGGG--

SUT1?/SacCer-Promoters/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCGCGCGGTA
CCCCGCGC----

MA0395.1_STP2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCGGTA------
TGATCGGCGCCGCACGACGA

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCGCGCGGTA--
NTCGCGCGCCTTNNN

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCGCGCGGTA
-GGCGCGCT-

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGCGCGGTA--
ANCGCGCGCCCTTNN