Information for motif17


Reverse Opposite:

p-value:1e-20
log p-value:-4.640e+01
Information Content per bp:1.541
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif15.09%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif1.87%
Average Position of motif in Targets156.1 +/- 82.9bp
Average Position of motif in Background137.2 +/- 102.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0261.1_lin-14/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:GGCCGAACAC
----GAACAC

MA0261.1_lin-14/Jaspar

Match Rank:2
Score:0.73
Offset:4
Orientation:forward strand
Alignment:GGCCGAACAC
----GAACAC

Deaf1/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGCCGAACAC
-CACGAA---

MA0185.1_Deaf1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGCCGAACAC
-CACGAA---

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGCCGAACAC
TCGGCCGA----

MA0361.1_RDS1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAACAC
CGGCCGA----

RDS1(MacIsaac)/Yeast

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAACAC
CGGCCG-----

MA0429.1_YLL054C/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAACAC
CGGCCGA----

PDR1/PDR1_YPD/[](Harbison)/Yeast

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAACAC
CCGCCGAATAA

PDR1(MacIsaac)/Yeast

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAACAC
CCGCCGAATAA