Information for motif34


Reverse Opposite:

p-value:1e-15
log p-value:-3.461e+01
Information Content per bp:1.675
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif9.47%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets106.8 +/- 81.8bp
Average Position of motif in Background40.3 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0485.1_Hoxc9/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCGCGA
GGCCATAAATCAC--

MA0401.1_SWI4/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TAAATCGCGA
--TTTCGCGT

abd-A/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAAATCGCGA
ATAATT-----

MA0435.1_YPR015C/Jaspar

Match Rank:4
Score:0.61
Offset:-8
Orientation:forward strand
Alignment:--------TAAATCGCGA--
TGAAGACGTAAATCCTTACA

MA0434.1_YPR013C/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAAATCGCGA
TGTAGATCA---

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAAATCGCGA----
NNAATTCTCGNTNAN

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TAAATCGCGA--
--AAACGCGAAA

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAAATCGCGA
CAAATCACTG

abd-A/dmmpmm(Down)/fly

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAAATCGCGA
ATAAAT-----

MA0329.1_MBP1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TAAATCGCGA
---NNCGCGT