Information for motif30


Reverse Opposite:

p-value:1e-20
log p-value:-4.718e+01
Information Content per bp:1.656
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif7.35%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets141.2 +/- 74.6bp
Average Position of motif in Background149.6 +/- 90.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

dl/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GATTTTCCCG
GGATTTTCCC-

dl/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GATTTTCCCG
GGATTTTCC--

MA0437.1_YPR196W/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GATTTTCCCG
-ATTTCTCCG

dl/dmmpmm(Down)/fly

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GATTTTCCCG
TGGATTTTCC--

dl/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GATTTTCCCG
GGATTTTCCCC

STB1(MacIsaac)/Yeast

Match Rank:6
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GATTTTCCCG
--TTTTCGCG

MA0105.3_NFKB1/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GATTTTCCCG
GGGAATTTCCC-

MA0541.1_EFL-1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GATTTTCCCG------
-AATTTCGCGCGNNNN

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GATTTTCCCG---
-VDTTTCCCGCCA

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:10
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GATTTTCCCG----
--TTTTCGCGCGAA