Information for motif24


Reverse Opposite:

p-value:1e-22
log p-value:-5.101e+01
Information Content per bp:1.601
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif32.37%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif10.00%
Average Position of motif in Targets152.5 +/- 85.5bp
Average Position of motif in Background146.9 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--TGTCAATC--
NCTGTCAATCAN

MA0434.1_YPR013C/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGTCAATC-
TGTAGATCA

MA0408.1_TOS8/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGTCAATC
CTGTCAAA-

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGTCAATC-----
GAAGATCAATCACTAA

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGTCAATC-
GSCTGTCACTCA

MA0070.1_PBX1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGTCAATC---
CCATCAATCAAA

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TGTCAATC-----
GAAGATCAATCACTTA

Achi/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAATC
GCTGTCAAAN

CBF(- other)/several species/AthaMap

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGTCAATC---
AATTCCAATTATA

MA0222.1_exd/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTCAATC
TGTCAAAN