Information for motif6


Reverse Opposite:

p-value:1e-35
log p-value:-8.114e+01
Information Content per bp:1.661
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.96%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets144.9 +/- 82.9bp
Average Position of motif in Background218.8 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCGAGATACC-----
GACAGAGATATCAGTGT

MA0527.1_ZBTB33/Jaspar

Match Rank:2
Score:0.67
Offset:-8
Orientation:reverse strand
Alignment:--------GCGAGATACC
NAGNTCTCGCGAGAN---

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GCGAGATACC
GTTCTCGCGAGANCC-

GFX(?)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GCGAGATACC
ATTCTCGCGAGA----

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCGAGATACC-
TTGACCGAGAATTCC

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCGAGATACC-
GNNACCGAGAATNNN

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGAGATACC
GGCGGGAAAH-

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGAGATACC
TGGCGGGAAAHB

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGAGATACC
GGCGGGAARN-

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCGAGATACC-
---AGATAASR