Information for motif10


Reverse Opposite:

p-value:1e-36
log p-value:-8.454e+01
Information Content per bp:1.734
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif7.17%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets133.1 +/- 85.7bp
Average Position of motif in Background233.0 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ACGCGTGTGT------
NNGCGTGTGTGCNGCN

MA0538.1_DAF-12/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACGCGTGTGT---
GTGTGTGTGTGCGTG

SeqBias: CA-repeat

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACGCGTGTGT-
-TGTGTGTGTG

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACGCGTGTGT
ACGCGTC---

MA0329.1_MBP1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACGCGTGTGT
NNCGCGT----

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACGCGTGTGT----
GGNGCGNCTGTTNNN

MBP1(MacIsaac)/Yeast

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACGCGTGTGT
ACGCGTC---

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACGCGTGTGT
NAVGCGCGTGDD-

MA0330.1_MBP1::SWI6/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACGCGTGTGT
AACGCGT----

MA0557.1_FHY3/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACGCGTGTGT
NNAGCGCGTGNN-