Information for motif32


Reverse Opposite:

p-value:1e-12
log p-value:-2.912e+01
Information Content per bp:1.684
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif10.61%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets128.8 +/- 79.9bp
Average Position of motif in Background196.4 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

gsb/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TACTTTGCCAAA
TAATTTACTAAA

gsb-n/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TACTTTGCCAAA
TAATTTACTAAA

exd/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TACTTTGCCAAA-
---NTTGTCAAAN

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TACTTTGCCAAA----
-CAATTGCAAAAATAT

MA0446.1_fkh/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TACTTTGCCAAA--
---TTAAGCAAACA

fkh/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TACTTTGCCAAA--
---TTANGCAAACA

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TACTTTGCCAAA
----TTGCCAAG

MA0222.1_exd/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TACTTTGCCAAA-
-----TGTCAAAN

PH0155.1_Prrx2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TACTTTGCCAAA
AAAGCTAATTAGCGAAA

MA0161.1_NFIC/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TACTTTGCCAAA
-----TGCCAA-