Information for motif43


Reverse Opposite:

p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.473
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif13.69%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif4.67%
Average Position of motif in Targets151.4 +/- 95.5bp
Average Position of motif in Background237.6 +/- 43.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0207.1_achi/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TGACAGAG
TGACAG--

MA0227.1_hth/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TGACAGAG
TGACAG--

MA0252.1_vis/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGACAGAG
TGACAG--

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TGACAGAG
CTNTGACAGN-

ZAP1(WRKY(Zn))/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGACAGAG
TTGACCGAG

Achi/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGACAGAG
NTTTGACAGC-

MA0408.1_TOS8/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGACAGAG
TTTGACAG--

Trl/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TGACAGAG---
-GAGAGAGCAA

MA0205.1_Trl/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TGACAGAG---
-GAGAGAGCAA

MA0589.1_ZAP1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGACAGAG--
TTGACCGAGCC