Information for motif32


Reverse Opposite:

p-value:1e-15
log p-value:-3.657e+01
Information Content per bp:1.758
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif14.74%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif2.42%
Average Position of motif in Targets159.1 +/- 82.1bp
Average Position of motif in Background213.9 +/- 81.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAAA-
CCCATTAAAT

zen/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CCACTAAA
-CATTAAA

MA0193.1_Lag1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CCACTAAA
CTACCAA-

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCACTAAA-----
AACCCAATAAAATTCG

cad/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCACTAAA-
CCATAAAAA

MA0151.1_ARID3A/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CCACTAAA
--ATTAAA

PHO2(MacIsaac)/Yeast

Match Rank:7
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CCACTAAA
--ATTAAG

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CCACTAAA----
CTTAACCACTTAAGGAT

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCACTAAA-----
CTACCAATAAAATTCT

MA0343.1_NDT80/Jaspar

Match Rank:10
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------CCACTAAA------
TTTCCGGCCACAAAAACGCAA