Information for motif26


Reverse Opposite:

p-value:1e-13
log p-value:-3.212e+01
Information Content per bp:1.812
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif11.36%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets131.6 +/- 98.0bp
Average Position of motif in Background100.9 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0391.1_STB4/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ATGTCGGA-
--CTCGGAA

MA0282.1_CEP3/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATGTCGGA--
--CTCGGAAA

MA0544.1_GEI-11/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATGTCGGA----
GTGTCGGCCGCT

MA0311.1_HAL9/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ATGTCGGA-
----CGGAA

GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTCGGA
CCCGTRARRTGTCGG-

MA0432.1_YNR063W/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATGTCGGA---
---TCGGAGAT

RGT1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ATGTCGGA---
----CGGANNA

SKO1(MacIsaac)/Yeast

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGTCGGA
ATGACGTA

MA0400.1_SUT2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATGTCGGA---------
NNNNNTTCGGAGTTTNNNNN

MA0438.1_YRM1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATGTCGGA
ATTTCCGT