Information for motif45


Reverse Opposite:

p-value:1e-6
log p-value:-1.562e+01
Information Content per bp:1.530
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif6.60%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.54%
Average Position of motif in Targets178.1 +/- 98.9bp
Average Position of motif in Background75.5 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0132.1_Pdx1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GCAAAATTAG
----AATTAG

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCAAAATTAG
NNTNNCAATATTAG

MA0075.1_Prrx2/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:GCAAAATTAG
----AATTA-

MA0457.1_PHDP/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCAAAATTAG
---TAATTAA

PhdP/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCAAAATTAG--
--NTAATTAANN

Dfd/dmmpmm(Down)/fly

Match Rank:6
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GCAAAATTAG
----AATTA-

MA0198.1_OdsH/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCAAAATTAG
---TAATTAG

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAATTAG
CAATTGCAAAAATAT

Ubx/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCAAAATTAG
---CAATTA-

tll/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCAAAATTAG
---AAATTAA