Information for motif31


Reverse Opposite:

p-value:1e-12
log p-value:-2.912e+01
Information Content per bp:1.712
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif10.61%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets151.5 +/- 90.7bp
Average Position of motif in Background97.4 +/- 48.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0081.1_SPIB/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGAGAAGAAA
--AGAGGAA-

MA0277.1_AZF1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGAGAAGAAA
-AAAAAGAAA

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGAGAAGAAA
RAAGAMGAMG

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGAGAAGAAA--
TACTGGAAAAAAAA

RLR1/RLR1_YPD/[](Harbison)/Yeast

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGAGAAGAAA--
AAAGAAGAAAAT

GLN3/GLN3_RAPA/8-GZF3,11-GLN3(Harbison)/Yeast

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGAGAAGAAA
-GATAAGATA

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGAGAAGAAA-
-NACAGGAAAT

MA0127.1_PEND/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGAGAAGAAA-
-AATAAGAAGT

MA0377.1_SFL1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CGAGAAGAAA-----
TAGAGAATAGAAGAAATAAAA

MA0120.1_id1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGAGAAGAAA--
CGAAAAGGAAAA