Homer de novo Motif Results (Motifs/WT-Specific.1.5.High.BG/)

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-493	-1.136e+03	31.17%	13.27%	53.1bp (61.9bp)	FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer(0.973) More Information | Similar Motifs Found	motif file (matrix)
2		1e-356	-8.202e+02	4.29%	0.29%	47.2bp (51.8bp)	BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.926) More Information | Similar Motifs Found	motif file (matrix)
3		1e-172	-3.968e+02	18.94%	9.91%	52.9bp (63.5bp)	Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer(0.966) More Information | Similar Motifs Found	motif file (matrix)
4		1e-171	-3.946e+02	18.42%	9.54%	53.0bp (60.3bp)	Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.965) More Information | Similar Motifs Found	motif file (matrix)
5		1e-139	-3.214e+02	44.00%	32.25%	54.7bp (73.7bp)	Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.905) More Information | Similar Motifs Found	motif file (matrix)
6		1e-77	-1.794e+02	8.75%	4.51%	54.3bp (54.8bp)	Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer(0.944) More Information | Similar Motifs Found	motif file (matrix)
7		1e-77	-1.783e+02	8.88%	4.62%	54.5bp (62.8bp)	MA0037.2_GATA3/Jaspar(0.967) More Information | Similar Motifs Found	motif file (matrix)
8		1e-75	-1.729e+02	0.56%	0.01%	50.4bp (0.0bp)	PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.666) More Information | Similar Motifs Found	motif file (matrix)
9		1e-55	-1.269e+02	0.54%	0.03%	59.9bp (18.4bp)	E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.725) More Information | Similar Motifs Found	motif file (matrix)
10		1e-52	-1.217e+02	0.60%	0.05%	54.9bp (42.8bp)	PB0202.1_Zfp410_2/Jaspar(0.841) More Information | Similar Motifs Found	motif file (matrix)
11		1e-52	-1.205e+02	7.65%	4.32%	53.0bp (86.4bp)	PB0180.1_Sp4_2/Jaspar(0.840) More Information | Similar Motifs Found	motif file (matrix)
12		1e-51	-1.189e+02	0.59%	0.04%	54.7bp (22.2bp)	PB0071.1_Sox4_1/Jaspar(0.724) More Information | Similar Motifs Found	motif file (matrix)
13		1e-50	-1.169e+02	0.42%	0.00%	58.9bp (0.0bp)	POL006.1_BREu/Jaspar(0.787) More Information | Similar Motifs Found	motif file (matrix)
14		1e-49	-1.133e+02	0.41%	0.02%	61.2bp (0.0bp)	PB0095.1_Zfp161_1/Jaspar(0.667) More Information | Similar Motifs Found	motif file (matrix)
15		1e-48	-1.114e+02	0.77%	0.09%	52.2bp (39.7bp)	MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer(0.796) More Information | Similar Motifs Found	motif file (matrix)
16		1e-47	-1.098e+02	0.40%	0.02%	51.3bp (25.7bp)	PB0040.1_Lef1_1/Jaspar(0.740) More Information | Similar Motifs Found	motif file (matrix)
17		1e-41	-9.630e+01	0.85%	0.14%	55.4bp (63.0bp)	PB0190.1_Tcfap2b_2/Jaspar(0.784) More Information | Similar Motifs Found	motif file (matrix)
18		1e-40	-9.418e+01	0.50%	0.05%	57.5bp (42.5bp)	POL013.1_MED-1/Jaspar(0.751) More Information | Similar Motifs Found	motif file (matrix)
19		1e-38	-8.809e+01	0.78%	0.13%	53.8bp (53.1bp)	MA0146.2_Zfx/Jaspar(0.771) More Information | Similar Motifs Found	motif file (matrix)
20		1e-38	-8.762e+01	0.42%	0.03%	52.8bp (23.8bp)	PB0002.1_Arid5a_1/Jaspar(0.641) More Information | Similar Motifs Found	motif file (matrix)
21		1e-36	-8.367e+01	0.46%	0.05%	52.3bp (26.1bp)	MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.659) More Information | Similar Motifs Found	motif file (matrix)
22		1e-35	-8.233e+01	0.32%	0.01%	54.3bp (5.2bp)	MA0599.1_KLF5/Jaspar(0.790) More Information | Similar Motifs Found	motif file (matrix)
23		1e-34	-7.902e+01	0.31%	0.02%	64.8bp (82.0bp)	MA0131.1_HINFP/Jaspar(0.634) More Information | Similar Motifs Found	motif file (matrix)
24		1e-30	-7.072e+01	0.36%	0.03%	57.1bp (47.5bp)	MA0493.1_Klf1/Jaspar(0.605) More Information | Similar Motifs Found	motif file (matrix)
25		1e-29	-6.853e+01	1.42%	0.48%	52.3bp (66.7bp)	Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer(0.930) More Information | Similar Motifs Found	motif file (matrix)
26		1e-29	-6.799e+01	0.35%	0.03%	56.2bp (30.2bp)	EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.623) More Information | Similar Motifs Found	motif file (matrix)
27		1e-27	-6.294e+01	0.27%	0.01%	52.2bp (0.0bp)	MA0527.1_ZBTB33/Jaspar(0.793) More Information | Similar Motifs Found	motif file (matrix)
28		1e-24	-5.736e+01	0.41%	0.05%	53.4bp (15.7bp)	PB0095.1_Zfp161_1/Jaspar(0.751) More Information | Similar Motifs Found	motif file (matrix)
29		1e-19	-4.512e+01	0.39%	0.07%	43.0bp (21.1bp)	Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.646) More Information | Similar Motifs Found	motif file (matrix)
30		1e-19	-4.483e+01	0.51%	0.11%	56.0bp (72.2bp)	PB0180.1_Sp4_2/Jaspar(0.686) More Information | Similar Motifs Found	motif file (matrix)
31		1e-19	-4.476e+01	0.35%	0.05%	52.6bp (52.7bp)	MA0502.1_NFYB/Jaspar(0.807) More Information | Similar Motifs Found	motif file (matrix)
32		1e-16	-3.693e+01	0.41%	0.09%	49.0bp (26.3bp)	PH0098.1_Lhx8/Jaspar(0.633) More Information | Similar Motifs Found	motif file (matrix)
33		1e-14	-3.320e+01	1.28%	0.61%	51.9bp (80.4bp)	MA0259.1_HIF1A::ARNT/Jaspar(0.618) More Information | Similar Motifs Found	motif file (matrix)
34		1e-14	-3.239e+01	0.41%	0.10%	50.2bp (46.8bp)	PB0179.1_Sp100_2/Jaspar(0.731) More Information | Similar Motifs Found	motif file (matrix)
35 *		1e-11	-2.598e+01	0.26%	0.06%	58.5bp (23.3bp)	NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.667) More Information | Similar Motifs Found	motif file (matrix)
36 *		1e-10	-2.428e+01	0.25%	0.05%	55.1bp (43.9bp)	PB0056.1_Rfxdc2_1/Jaspar(0.775) More Information | Similar Motifs Found	motif file (matrix)