Homer Known Motif Enrichment Results (Motifs/WT-Specific.1.5.High)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 10561, Total Background Sequences = 39041
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-431-9.937e+020.00002483.023.51%3494.28.95%motif file (matrix) pdf
2FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-408-9.395e+020.00002102.019.90%2727.66.99%motif file (matrix) pdf
3Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-375-8.649e+020.00001946.018.42%2520.66.46%motif file (matrix) pdf
4CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-346-7.975e+020.0000738.06.99%408.81.05%motif file (matrix) pdf
5BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-311-7.170e+020.0000848.08.03%623.51.60%motif file (matrix) pdf
6Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-260-6.008e+020.00002153.020.38%3620.19.28%motif file (matrix) pdf
7FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-170-3.933e+020.0000974.09.22%1299.73.33%motif file (matrix) pdf
8Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-160-3.706e+020.00001487.014.08%2583.56.62%motif file (matrix) pdf
9Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-140-3.234e+020.00003161.029.93%7653.519.61%motif file (matrix) pdf
10Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-116-2.684e+020.00001531.014.50%3057.77.84%motif file (matrix) pdf
11Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-115-2.660e+020.00002128.020.15%4786.312.27%motif file (matrix) pdf
12Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-105-2.436e+020.00002807.026.58%7006.017.95%motif file (matrix) pdf
13Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-92-2.138e+020.00004546.043.04%13050.833.45%motif file (matrix) pdf
14Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-89-2.070e+020.00001418.013.43%3002.97.70%motif file (matrix) pdf
15Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-88-2.043e+020.00002946.027.89%7718.719.78%motif file (matrix) pdf
16Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-87-2.005e+020.00001624.015.38%3629.59.30%motif file (matrix) pdf
17Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-79-1.838e+020.00001010.09.56%1969.95.05%motif file (matrix) pdf
18GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-78-1.802e+020.00001910.018.08%4601.911.79%motif file (matrix) pdf
19Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-75-1.744e+020.0000916.08.67%1753.84.49%motif file (matrix) pdf
20Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-61-1.411e+020.00002292.021.70%6075.515.57%motif file (matrix) pdf
21Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-57-1.320e+020.00001255.011.88%2911.67.46%motif file (matrix) pdf
22CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-54-1.260e+020.00002891.027.37%8180.520.96%motif file (matrix) pdf
23Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-53-1.239e+020.0000562.05.32%1011.02.59%motif file (matrix) pdf
24Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-49-1.147e+020.00001971.018.66%5254.213.47%motif file (matrix) pdf
25Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-44-1.015e+020.00004737.044.85%14893.538.17%motif file (matrix) pdf
26Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-42-9.872e+010.00002432.023.03%6912.817.72%motif file (matrix) pdf
27Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-42-9.726e+010.00003633.034.40%11033.928.28%motif file (matrix) pdf
28E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-38-8.929e+010.00002229.021.10%6332.216.23%motif file (matrix) pdf
29Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-38-8.831e+010.0000414.03.92%754.01.93%motif file (matrix) pdf
30SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-37-8.694e+010.00005811.055.02%19015.948.73%motif file (matrix) pdf
31Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-31-7.266e+010.0000321.03.04%571.51.46%motif file (matrix) pdf
32Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-31-7.181e+010.00001575.014.91%4356.111.16%motif file (matrix) pdf
33Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-30-7.072e+010.0000615.05.82%1383.03.54%motif file (matrix) pdf
34Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-29-6.777e+010.00004568.043.25%14767.837.85%motif file (matrix) pdf
35Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-29-6.735e+010.00001812.017.16%5180.013.28%motif file (matrix) pdf
36KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-23-5.336e+010.00001756.016.63%5155.913.21%motif file (matrix) pdf
37Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-21-5.046e+010.0000371.03.51%795.12.04%motif file (matrix) pdf
38E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-21-5.008e+010.00002008.019.01%6048.215.50%motif file (matrix) pdf
39MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-20-4.784e+010.00001573.014.89%4612.011.82%motif file (matrix) pdf
40NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-19-4.588e+010.00001127.010.67%3162.38.10%motif file (matrix) pdf
41HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer1e-19-4.452e+010.0000508.04.81%1227.43.15%motif file (matrix) pdf
42OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-18-4.173e+010.0000183.01.73%327.00.84%motif file (matrix) pdf
43REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-16-3.914e+010.000037.00.35%22.00.06%motif file (matrix) pdf
44RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-16-3.805e+010.0000157.01.49%274.80.70%motif file (matrix) pdf
45Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-15-3.666e+010.000042.00.40%32.00.08%motif file (matrix) pdf
46Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-15-3.568e+010.0000168.01.59%310.00.79%motif file (matrix) pdf
47EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-15-3.467e+010.00001455.013.78%4390.011.25%motif file (matrix) pdf
48Sp1(Zf)/Promoter/Homer1e-14-3.358e+010.0000351.03.32%832.92.13%motif file (matrix) pdf
49Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-14-3.323e+010.0000624.05.91%1673.24.29%motif file (matrix) pdf
50Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-13-3.153e+010.00001892.017.91%5934.015.21%motif file (matrix) pdf
51X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-13-3.121e+010.0000177.01.68%351.10.90%motif file (matrix) pdf
52Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-12-2.960e+010.0000167.01.58%331.80.85%motif file (matrix) pdf
53Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-12-2.897e+010.00001040.09.85%3076.37.88%motif file (matrix) pdf
54Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-12-2.819e+010.0000299.02.83%713.31.83%motif file (matrix) pdf
55Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-11-2.681e+010.00002297.021.75%7435.719.06%motif file (matrix) pdf
56TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-11-2.658e+010.0000136.01.29%261.30.67%motif file (matrix) pdf
57CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-11-2.606e+010.000042.00.40%43.60.11%motif file (matrix) pdf
58Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-11-2.601e+010.0000278.02.63%665.41.71%motif file (matrix) pdf
59Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-11-2.594e+010.00001435.013.59%4458.311.43%motif file (matrix) pdf
60TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-11-2.561e+010.0000894.08.46%2635.26.75%motif file (matrix) pdf
61TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-10-2.494e+010.0000674.06.38%1919.34.92%motif file (matrix) pdf
62FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-10-2.305e+010.000079.00.75%129.70.33%motif file (matrix) pdf
63ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-8-1.966e+010.00001931.018.28%6305.116.16%motif file (matrix) pdf
64Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-7-1.732e+010.0000405.03.83%1133.72.91%motif file (matrix) pdf
65NFY(CCAAT)/Promoter/Homer1e-7-1.725e+010.0000798.07.56%2435.26.24%motif file (matrix) pdf
66Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-7-1.693e+010.0000502.04.75%1453.73.73%motif file (matrix) pdf
67Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-6-1.602e+010.0000635.06.01%1906.74.89%motif file (matrix) pdf
68AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-6-1.602e+010.0000735.06.96%2242.75.75%motif file (matrix) pdf
69ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-6-1.516e+010.00001640.015.53%5389.613.81%motif file (matrix) pdf
70EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-6-1.460e+010.0000310.02.94%857.72.20%motif file (matrix) pdf
71Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-6-1.441e+010.00001648.015.60%5436.413.93%motif file (matrix) pdf
72BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-5-1.373e+010.0000623.05.90%1901.94.87%motif file (matrix) pdf
73MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-5-1.362e+010.00001019.09.65%3257.38.35%motif file (matrix) pdf
74MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-5-1.309e+010.00001074.010.17%3459.78.87%motif file (matrix) pdf
75Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-5-1.298e+010.000081.00.77%171.30.44%motif file (matrix) pdf
76Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-5-1.262e+010.00002300.021.78%7804.520.00%motif file (matrix) pdf
77SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-5-1.208e+010.00001187.011.24%3876.49.93%motif file (matrix) pdf
78EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-5-1.176e+010.0000771.07.30%2440.16.25%motif file (matrix) pdf
79Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-5-1.156e+010.0000290.02.75%826.92.12%motif file (matrix) pdf
80Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-4-1.139e+010.0000247.02.34%689.61.77%motif file (matrix) pdf
81Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-4-1.072e+010.0001757.07.17%2413.46.19%motif file (matrix) pdf
82PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-4-9.891e+000.0002177.01.68%481.51.23%motif file (matrix) pdf
83c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-4-9.804e+000.0002274.02.59%795.92.04%motif file (matrix) pdf
84EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-4-9.590e+000.0002282.02.67%825.02.11%motif file (matrix) pdf
85GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-4-9.565e+000.00021039.09.84%3421.68.77%motif file (matrix) pdf
86GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-4-9.543e+000.0002140.01.33%368.40.94%motif file (matrix) pdf
87Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-4-9.541e+000.00021231.011.65%4097.110.50%motif file (matrix) pdf
88ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-4-9.330e+000.00021174.011.12%3902.810.00%motif file (matrix) pdf
89NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-4-9.285e+000.000369.00.65%156.90.40%motif file (matrix) pdf
90Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-3-7.881e+000.0010101.00.96%261.60.67%motif file (matrix) pdf
91AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-3-7.756e+000.00121672.015.83%5723.414.67%motif file (matrix) pdf
92GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-7.751e+000.001271.00.67%171.90.44%motif file (matrix) pdf
93Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-3-7.639e+000.0013802.07.59%2642.06.77%motif file (matrix) pdf
94Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-3-7.552e+000.0014372.03.52%1156.22.96%motif file (matrix) pdf
95Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-3-7.490e+000.0014272.02.58%820.02.10%motif file (matrix) pdf
96ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-3-6.918e+000.0025801.07.58%2658.06.81%motif file (matrix) pdf
97E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-2-6.850e+000.0027445.04.21%1419.53.64%motif file (matrix) pdf
98Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-2-6.673e+000.0032193.01.83%569.11.46%motif file (matrix) pdf
99PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-2-6.663e+000.0032364.03.45%1145.72.94%motif file (matrix) pdf
100JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-2-6.629e+000.003388.00.83%231.90.59%motif file (matrix) pdf
101BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer1e-2-6.560e+000.00341595.015.10%5493.614.08%motif file (matrix) pdf
102Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer1e-2-6.297e+000.0044220.02.08%664.01.70%motif file (matrix) pdf
103Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-2-6.259e+000.0046546.05.17%1782.24.57%motif file (matrix) pdf
104EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-2-6.210e+000.0048637.06.03%2101.05.38%motif file (matrix) pdf
105PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-5.719e+000.0077561.05.31%1848.54.74%motif file (matrix) pdf
106Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-2-5.717e+000.0077212.02.01%647.01.66%motif file (matrix) pdf
107ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER1e-2-5.675e+000.007956.00.53%140.70.36%motif file (matrix) pdf
108CRE(bZIP)/Promoter/Homer1e-2-5.602e+000.0084187.01.77%564.31.45%motif file (matrix) pdf
109MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-2-5.382e+000.0104277.02.62%872.22.24%motif file (matrix) pdf
110EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-2-5.355e+000.01061397.013.23%4832.312.38%motif file (matrix) pdf
111Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-2-5.322e+000.0108163.01.54%488.91.25%motif file (matrix) pdf
112Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer1e-2-5.259e+000.0114151.01.43%449.51.15%motif file (matrix) pdf
113Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-2-5.097e+000.0133212.02.01%656.21.68%motif file (matrix) pdf
114Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-2-4.720e+000.01922444.023.14%8653.022.18%motif file (matrix) pdf