Homer Known Motif Enrichment Results (Motifs/delHx-Specific.4.Middle)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 5762, Total Background Sequences = 43867
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-156-3.602e+020.00001259.021.85%4342.89.90%motif file (matrix) pdf
2FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-147-3.387e+020.00001065.018.48%3451.77.87%motif file (matrix) pdf
3CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-115-2.663e+020.0000284.04.93%383.40.87%motif file (matrix) pdf
4GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-115-2.661e+020.00001395.024.21%5725.313.05%motif file (matrix) pdf
5Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-114-2.644e+020.00001057.018.34%3834.18.74%motif file (matrix) pdf
6Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-112-2.593e+020.0000729.012.65%2187.04.98%motif file (matrix) pdf
7Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-110-2.552e+020.0000784.013.60%2474.05.64%motif file (matrix) pdf
8BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-110-2.551e+020.0000334.05.80%560.01.28%motif file (matrix) pdf
9Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-105-2.437e+020.0000882.015.30%3033.76.91%motif file (matrix) pdf
10Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-97-2.255e+020.00001078.018.71%4212.29.60%motif file (matrix) pdf
11Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-62-1.448e+020.00001258.021.83%6002.413.68%motif file (matrix) pdf
12Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-62-1.442e+020.0000664.011.52%2513.45.73%motif file (matrix) pdf
13CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-55-1.287e+020.00001783.030.94%9631.821.95%motif file (matrix) pdf
14Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-55-1.280e+020.00001770.030.71%9553.621.77%motif file (matrix) pdf
15Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-54-1.265e+020.0000853.014.80%3728.98.50%motif file (matrix) pdf
16Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-50-1.152e+020.00001667.028.93%9046.320.61%motif file (matrix) pdf
17Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-47-1.085e+020.00001352.023.46%7051.816.07%motif file (matrix) pdf
18FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-47-1.085e+020.0000432.07.50%1526.13.48%motif file (matrix) pdf
19Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-39-9.100e+010.00001439.024.97%7887.817.97%motif file (matrix) pdf
20Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-38-8.784e+010.0000733.012.72%3402.47.75%motif file (matrix) pdf
21Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-32-7.492e+010.00002662.046.19%16870.638.44%motif file (matrix) pdf
22Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-32-7.388e+010.00001144.019.85%6198.614.12%motif file (matrix) pdf
23Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-29-6.898e+010.00002284.039.63%14237.332.44%motif file (matrix) pdf
24Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-25-5.760e+010.00001343.023.30%7833.417.85%motif file (matrix) pdf
25Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-24-5.639e+010.00002657.046.10%17294.939.41%motif file (matrix) pdf
26Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-20-4.737e+010.0000801.013.90%4382.39.99%motif file (matrix) pdf
27Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-14-3.437e+010.00001795.031.15%11611.526.46%motif file (matrix) pdf
28E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-13-3.155e+010.00001028.017.84%6248.814.24%motif file (matrix) pdf
29Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-13-3.059e+010.0000228.03.96%1022.62.33%motif file (matrix) pdf
30TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-13-3.005e+010.0000414.07.18%2168.34.94%motif file (matrix) pdf
31TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-12-2.788e+010.0000528.09.16%2943.86.71%motif file (matrix) pdf
32E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-11-2.754e+010.00001042.018.08%6452.614.70%motif file (matrix) pdf
33RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-11-2.732e+010.000088.01.53%286.10.65%motif file (matrix) pdf
34X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-11-2.607e+010.0000106.01.84%384.20.88%motif file (matrix) pdf
35Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-11-2.596e+010.0000162.02.81%689.31.57%motif file (matrix) pdf
36SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-9-2.239e+010.00002920.050.67%20425.046.54%motif file (matrix) pdf
37Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-9-2.153e+010.0000194.03.37%923.52.10%motif file (matrix) pdf
38Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-8-2.068e+010.0000362.06.28%1993.34.54%motif file (matrix) pdf
39Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-8-2.034e+010.0000317.05.50%1708.53.89%motif file (matrix) pdf
40MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-8-1.945e+010.0000762.013.22%4730.510.78%motif file (matrix) pdf
41Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-8-1.931e+010.000086.01.49%327.00.75%motif file (matrix) pdf
42Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-8-1.921e+010.0000710.012.32%4377.09.97%motif file (matrix) pdf
43GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-8-1.860e+010.0000103.01.79%425.50.97%motif file (matrix) pdf
44NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-7-1.668e+010.000048.00.83%151.80.35%motif file (matrix) pdf
45Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-7-1.643e+010.0000840.014.58%5373.012.24%motif file (matrix) pdf
46NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-6-1.556e+010.0000541.09.39%3312.17.55%motif file (matrix) pdf
47EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-6-1.522e+010.0000682.011.83%4301.89.80%motif file (matrix) pdf
48Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-6-1.450e+010.0000239.04.15%1309.92.98%motif file (matrix) pdf
49HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer1e-6-1.406e+010.0000293.05.08%1671.23.81%motif file (matrix) pdf
50Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-6-1.393e+010.00001201.020.84%8056.318.36%motif file (matrix) pdf
51KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-6-1.383e+010.0000782.013.57%5053.411.51%motif file (matrix) pdf
52Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-5-1.290e+010.000094.01.63%429.30.98%motif file (matrix) pdf
53Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-5-1.287e+010.0000144.02.50%732.31.67%motif file (matrix) pdf
54TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-5-1.191e+010.000066.01.15%278.30.63%motif file (matrix) pdf
55Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-5-1.181e+010.0000243.04.22%1388.73.16%motif file (matrix) pdf
56MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-4-1.139e+010.0000547.09.49%3482.37.93%motif file (matrix) pdf
57CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-4-1.119e+010.000120.00.35%49.80.11%motif file (matrix) pdf
58Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-4-1.112e+010.0001145.02.52%765.21.74%motif file (matrix) pdf
59Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-4-1.089e+010.0001836.014.51%5555.812.66%motif file (matrix) pdf
60AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-4-1.067e+010.0001403.06.99%2502.25.70%motif file (matrix) pdf
61Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-4-9.848e+000.0002349.06.06%2154.24.91%motif file (matrix) pdf
62Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer1e-4-9.467e+000.0003379.06.58%2373.25.41%motif file (matrix) pdf
63GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-4-9.343e+000.000390.01.56%448.11.02%motif file (matrix) pdf
64Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-4-9.238e+000.0004687.011.92%4558.510.39%motif file (matrix) pdf
65Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-3-9.071e+000.0004208.03.61%1216.02.77%motif file (matrix) pdf
66NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-3-9.047e+000.0004296.05.14%1813.34.13%motif file (matrix) pdf
67Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-3-9.046e+000.000482.01.42%403.90.92%motif file (matrix) pdf
68Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-3-8.907e+000.0005479.08.31%3092.47.05%motif file (matrix) pdf
69GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-8.420e+000.000855.00.95%249.20.57%motif file (matrix) pdf
70ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-3-8.394e+000.0008868.015.06%5904.213.45%motif file (matrix) pdf
71EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-3-8.348e+000.0008146.02.53%821.41.87%motif file (matrix) pdf
72Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-3-8.249e+000.0009479.08.31%3117.27.10%motif file (matrix) pdf
73E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-3-8.167e+000.0010238.04.13%1441.33.28%motif file (matrix) pdf
74Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-3-8.166e+000.001053.00.92%240.80.55%motif file (matrix) pdf
75GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-7.849e+000.001349.00.85%221.00.50%motif file (matrix) pdf
76ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-3-7.458e+000.00191023.017.75%7087.116.15%motif file (matrix) pdf
77Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-3-7.033e+000.0028148.02.57%862.31.96%motif file (matrix) pdf
78Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-2-6.859e+000.0033208.03.61%1272.12.90%motif file (matrix) pdf
79BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-2-6.709e+000.0038330.05.73%2124.84.84%motif file (matrix) pdf
80Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-2-6.678e+000.0039259.04.49%1629.13.71%motif file (matrix) pdf
81ETS(ETS)/Promoter/Homer1e-2-6.644e+000.0040190.03.30%1155.22.63%motif file (matrix) pdf
82EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-2-6.617e+000.0040419.07.27%2757.36.28%motif file (matrix) pdf
83AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-2-6.223e+000.0059627.010.88%4270.89.73%motif file (matrix) pdf
84Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-2-6.087e+000.006717.00.29%58.50.13%motif file (matrix) pdf
85MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-2-6.043e+000.0069514.08.92%3463.77.89%motif file (matrix) pdf
86REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-2-5.982e+000.007211.00.19%30.20.07%motif file (matrix) pdf
87Sp1(Zf)/Promoter/Homer1e-2-5.811e+000.0085133.02.31%790.81.80%motif file (matrix) pdf
88EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-2-5.206e+000.0153129.02.24%779.01.77%motif file (matrix) pdf
89TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-2-5.159e+000.015979.01.37%445.51.02%motif file (matrix) pdf
90AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-2-5.138e+000.0160464.08.05%3148.27.17%motif file (matrix) pdf
91SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-2-4.980e+000.0186625.010.85%4326.89.86%motif file (matrix) pdf
92Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-2-4.931e+000.0193868.015.06%6112.313.93%motif file (matrix) pdf
93OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-2-4.904e+000.019679.01.37%450.51.03%motif file (matrix) pdf
94NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-2-4.869e+000.0201215.03.73%1383.83.15%motif file (matrix) pdf
95NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer1e-2-4.799e+000.021337.00.64%183.00.42%motif file (matrix) pdf
96RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-2-4.754e+000.0221190.03.30%1212.42.76%motif file (matrix) pdf