Homer de novo Motif Results (Motifs/Common.2.Middle/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 3814
Total background sequences = 45724
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-135-3.125e+0210.17%2.16%51.9bp (63.1bp)Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer(0.937)
More Information | Similar Motifs Found		motif file (matrix)
2 1e-120-2.765e+028.78%1.81%50.5bp (55.8bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.926)
More Information | Similar Motifs Found		motif file (matrix)
3 1e-107-2.474e+0217.12%6.61%53.9bp (61.7bp)Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer(0.958)
More Information | Similar Motifs Found		motif file (matrix)
4 1e-103-2.391e+0221.44%9.62%54.0bp (60.2bp)MA0593.1_FOXP2/Jaspar(0.889)
More Information | Similar Motifs Found		motif file (matrix)
5 1e-102-2.349e+0222.49%10.44%51.1bp (58.4bp)POL003.1_GC-box/Jaspar(0.946)
More Information | Similar Motifs Found		motif file (matrix)
6 1e-75-1.749e+0227.39%15.61%55.8bp (59.5bp)NFY(CCAAT)/Promoter/Homer(0.817)
More Information | Similar Motifs Found		motif file (matrix)
7 1e-51-1.180e+028.10%3.04%51.6bp (55.8bp)TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer(0.944)
More Information | Similar Motifs Found		motif file (matrix)
8 1e-47-1.088e+029.36%3.99%51.4bp (56.3bp)Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer(0.973)
More Information | Similar Motifs Found		motif file (matrix)
9 1e-37-8.538e+017.58%3.27%51.0bp (58.2bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.940)
More Information | Similar Motifs Found		motif file (matrix)
10 1e-29-6.860e+0110.07%5.40%55.6bp (58.2bp)MA0477.1_FOSL1/Jaspar(0.953)
More Information | Similar Motifs Found		motif file (matrix)
11 1e-24-5.620e+016.68%3.30%55.2bp (55.8bp)MA0093.2_USF1/Jaspar(0.912)
More Information | Similar Motifs Found		motif file (matrix)
12 1e-16-3.874e+0118.64%13.71%57.2bp (58.9bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.823)
More Information | Similar Motifs Found		motif file (matrix)
13 1e-16-3.725e+014.98%2.58%52.6bp (56.4bp)MA0018.2_CREB1/Jaspar(0.943)
More Information | Similar Motifs Found		motif file (matrix)
14 1e-15-3.553e+013.67%1.71%52.0bp (57.3bp)NRF1/Promoter/Homer(0.921)
More Information | Similar Motifs Found		motif file (matrix)
15 1e-14-3.425e+012.31%0.87%55.1bp (58.4bp)GFY(?)/Promoter/Homer(0.993)
More Information | Similar Motifs Found		motif file (matrix)
16 1e-14-3.318e+010.26%0.01%26.6bp (15.9bp)MA0029.1_Mecom/Jaspar(0.626)
More Information | Similar Motifs Found		motif file (matrix)
17 1e-13-3.151e+010.37%0.02%43.2bp (71.2bp)Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.694)
More Information | Similar Motifs Found		motif file (matrix)
18 1e-13-3.053e+011.47%0.45%52.1bp (56.3bp)MA0509.1_Rfx1/Jaspar(0.914)
More Information | Similar Motifs Found		motif file (matrix)
19 *1e-11-2.705e+012.23%0.94%52.1bp (60.7bp)Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer(0.647)
More Information | Similar Motifs Found		motif file (matrix)
20 *1e-11-2.600e+010.18%0.00%64.8bp (22.0bp)PB0126.1_Gata5_2/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
21 *1e-4-1.031e+010.16%0.02%75.3bp (49.8bp)PB0199.1_Zfp161_2/Jaspar(0.654)
More Information | Similar Motifs Found		motif file (matrix)