Homer de novo Motif Results (Motifs/delHx-Specific.2.Middle/)

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-956	-2.202e+03	23.50%	9.45%	52.5bp (60.1bp)	FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.959) More Information | Similar Motifs Found	motif file (matrix)
2		1e-575	-1.326e+03	19.91%	9.36%	53.8bp (58.6bp)	GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.965) More Information | Similar Motifs Found	motif file (matrix)
3		1e-471	-1.086e+03	4.66%	0.85%	47.5bp (57.3bp)	BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.932) More Information | Similar Motifs Found	motif file (matrix)
4		1e-330	-7.605e+02	20.35%	11.85%	53.8bp (60.4bp)	Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.892) More Information | Similar Motifs Found	motif file (matrix)
5		1e-261	-6.011e+02	35.23%	25.53%	55.1bp (58.6bp)	Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer(0.895) More Information | Similar Motifs Found	motif file (matrix)
6		1e-183	-4.233e+02	9.08%	4.78%	53.5bp (56.7bp)	PB0207.1_Zic3_2/Jaspar(0.946) More Information | Similar Motifs Found	motif file (matrix)
7		1e-178	-4.115e+02	9.32%	5.00%	53.4bp (55.1bp)	Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer(0.954) More Information | Similar Motifs Found	motif file (matrix)
8		1e-133	-3.073e+02	11.94%	7.57%	53.1bp (58.0bp)	MA0599.1_KLF5/Jaspar(0.954) More Information | Similar Motifs Found	motif file (matrix)
9		1e-84	-1.940e+02	5.76%	3.36%	55.0bp (58.6bp)	MA0090.1_TEAD1/Jaspar(0.939) More Information | Similar Motifs Found	motif file (matrix)
10		1e-55	-1.283e+02	15.87%	12.50%	55.2bp (57.9bp)	Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.729) More Information | Similar Motifs Found	motif file (matrix)
11		1e-54	-1.246e+02	2.37%	1.18%	51.2bp (60.7bp)	Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.915) More Information | Similar Motifs Found	motif file (matrix)
12		1e-42	-9.841e+01	0.25%	0.03%	51.9bp (4.2bp)	PB0155.1_Osr2_2/Jaspar(0.669) More Information | Similar Motifs Found	motif file (matrix)
13		1e-42	-9.831e+01	0.22%	0.02%	50.9bp (63.5bp)	PH0124.1_Obox5_1/Jaspar(0.704) More Information | Similar Motifs Found	motif file (matrix)
14		1e-29	-6.803e+01	3.51%	2.36%	56.7bp (56.2bp)	Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer(0.970) More Information | Similar Motifs Found	motif file (matrix)
15		1e-27	-6.282e+01	0.32%	0.07%	54.6bp (52.4bp)	MA0507.1_POU2F2/Jaspar(0.820) More Information | Similar Motifs Found	motif file (matrix)
16		1e-26	-6.111e+01	0.12%	0.01%	47.7bp (0.0bp)	PH0137.1_Pitx1/Jaspar(0.786) More Information | Similar Motifs Found	motif file (matrix)
17		1e-24	-5.748e+01	7.69%	6.08%	56.5bp (56.6bp)	MA0062.2_GABPA/Jaspar(0.861) More Information | Similar Motifs Found	motif file (matrix)
18		1e-24	-5.560e+01	0.12%	0.01%	53.3bp (24.3bp)	PB0181.1_Spdef_2/Jaspar(0.622) More Information | Similar Motifs Found	motif file (matrix)
19		1e-23	-5.390e+01	0.45%	0.15%	54.2bp (58.4bp)	Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer(0.686) More Information | Similar Motifs Found	motif file (matrix)
20		1e-22	-5.150e+01	0.13%	0.01%	57.3bp (0.0bp)	Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer(0.729) More Information | Similar Motifs Found	motif file (matrix)
21		1e-17	-3.991e+01	0.09%	0.01%	53.6bp (38.3bp)	PH0137.1_Pitx1/Jaspar(0.676) More Information | Similar Motifs Found	motif file (matrix)
22		1e-12	-2.984e+01	0.12%	0.03%	62.9bp (55.7bp)	MA0124.1_NKX3-1/Jaspar(0.644) More Information | Similar Motifs Found	motif file (matrix)
23 *		1e-11	-2.748e+01	0.11%	0.02%	50.7bp (0.0bp)	MA0151.1_ARID3A/Jaspar(0.744) More Information | Similar Motifs Found	motif file (matrix)
24 *		1e-11	-2.745e+01	0.17%	0.05%	49.6bp (38.2bp)	PH0006.1_Barhl2/Jaspar(0.753) More Information | Similar Motifs Found	motif file (matrix)