Homer de novo Motif Results (Motifs.High.delHx-Specific/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 13883
Total background sequences = 35826
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-556-1.282e+038.43%1.25%46.6bp (60.6bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.908)
More Information | Similar Motifs Found		motif file (matrix)
2 1e-419-9.658e+0226.76%12.83%52.5bp (60.0bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.950)
More Information | Similar Motifs Found		motif file (matrix)
3 1e-149-3.453e+0211.81%5.92%52.7bp (58.0bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.956)
More Information | Similar Motifs Found		motif file (matrix)
4 1e-117-2.705e+0213.12%7.46%53.8bp (58.4bp)MA0515.1_Sox6/Jaspar(0.958)
More Information | Similar Motifs Found		motif file (matrix)
5 1e-108-2.503e+0211.63%6.50%54.2bp (57.8bp)MA0037.2_GATA3/Jaspar(0.960)
More Information | Similar Motifs Found		motif file (matrix)
6 1e-63-1.463e+0216.37%11.54%55.5bp (57.3bp)MA0079.3_SP1/Jaspar(0.888)
More Information | Similar Motifs Found		motif file (matrix)
7 1e-57-1.333e+023.62%1.62%53.5bp (61.4bp)MA0046.1_HNF1A/Jaspar(0.783)
More Information | Similar Motifs Found		motif file (matrix)
8 1e-45-1.039e+021.60%0.52%53.2bp (54.6bp)MA0509.1_Rfx1/Jaspar(0.911)
More Information | Similar Motifs Found		motif file (matrix)
9 1e-28-6.568e+010.15%0.00%61.1bp (0.0bp)Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer(0.600)
More Information | Similar Motifs Found		motif file (matrix)
10 1e-26-6.025e+016.32%4.35%55.4bp (58.0bp)Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer(0.868)
More Information | Similar Motifs Found		motif file (matrix)
11 1e-25-5.808e+012.05%1.03%54.3bp (55.7bp)MA0523.1_TCF7L2/Jaspar(0.895)
More Information | Similar Motifs Found		motif file (matrix)
12 1e-24-5.670e+013.11%1.82%54.0bp (60.3bp)PH0137.1_Pitx1/Jaspar(0.928)
More Information | Similar Motifs Found		motif file (matrix)
13 1e-22-5.231e+010.17%0.01%59.5bp (40.0bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.803)
More Information | Similar Motifs Found		motif file (matrix)
14 1e-22-5.211e+010.74%0.23%52.0bp (52.7bp)MA0478.1_FOSL2/Jaspar(0.824)
More Information | Similar Motifs Found		motif file (matrix)
15 1e-19-4.505e+014.29%2.90%57.0bp (60.0bp)MA0498.1_Meis1/Jaspar(0.792)
More Information | Similar Motifs Found		motif file (matrix)
16 1e-18-4.173e+010.13%0.01%59.2bp (19.2bp)MA0060.2_NFYA/Jaspar(0.732)
More Information | Similar Motifs Found		motif file (matrix)
17 1e-16-3.772e+017.76%6.01%56.0bp (58.0bp)PB0203.1_Zfp691_2/Jaspar(0.737)
More Information | Similar Motifs Found		motif file (matrix)
18 1e-15-3.549e+010.12%0.01%41.9bp (14.5bp)PB0181.1_Spdef_2/Jaspar(0.611)
More Information | Similar Motifs Found		motif file (matrix)
19 1e-15-3.480e+010.13%0.01%48.8bp (28.0bp)PH0112.1_Nkx2-3/Jaspar(0.696)
More Information | Similar Motifs Found		motif file (matrix)
20 1e-14-3.307e+010.22%0.03%56.8bp (38.9bp)MA0038.1_Gfi1/Jaspar(0.687)
More Information | Similar Motifs Found		motif file (matrix)
21 1e-12-2.937e+010.12%0.01%44.3bp (58.1bp)PH0168.1_Hnf1b/Jaspar(0.653)
More Information | Similar Motifs Found		motif file (matrix)
22 1e-12-2.862e+010.14%0.02%63.6bp (47.4bp)Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer(0.951)
More Information | Similar Motifs Found		motif file (matrix)
23 *1e-11-2.753e+010.12%0.01%54.8bp (47.5bp)MA0479.1_FOXH1/Jaspar(0.670)
More Information | Similar Motifs Found		motif file (matrix)
24 *1e-10-2.377e+010.09%0.01%51.2bp (9.1bp)PB0202.1_Zfp410_2/Jaspar(0.665)
More Information | Similar Motifs Found		motif file (matrix)
25 *1e-9-2.192e+010.12%0.01%54.0bp (51.5bp)MA0047.2_Foxa2/Jaspar(0.628)
More Information | Similar Motifs Found		motif file (matrix)
26 *1e-8-1.874e+010.55%0.27%51.8bp (54.2bp)MF0009.1_TRP(MYB)_class/Jaspar(0.678)
More Information | Similar Motifs Found		motif file (matrix)
27 *1e-7-1.616e+010.09%0.01%46.2bp (6.1bp)PB0159.1_Rfx4_2/Jaspar(0.615)
More Information | Similar Motifs Found		motif file (matrix)
28 *1e-6-1.562e+012.06%1.50%59.4bp (58.2bp)MA0092.1_Hand1::Tcfe2a/Jaspar(0.762)
More Information | Similar Motifs Found		motif file (matrix)
29 *1e-6-1.446e+011.44%1.00%55.9bp (63.3bp)PB0182.1_Srf_2/Jaspar(0.839)
More Information | Similar Motifs Found		motif file (matrix)