Homer de novo Motif Results (Motifs.Dedup.Middle.Overlapping/)

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-642	-1.480e+03	33.07%	17.99%	54.2bp (59.4bp)	POL004.1_CCAAT-box/Jaspar(0.851) More Information | Similar Motifs Found	motif file (matrix)
2		1e-513	-1.183e+03	25.65%	13.49%	53.6bp (59.7bp)	POL003.1_GC-box/Jaspar(0.927) More Information | Similar Motifs Found	motif file (matrix)
3		1e-452	-1.041e+03	14.64%	6.16%	53.8bp (57.4bp)	Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer(0.901) More Information | Similar Motifs Found	motif file (matrix)
4		1e-374	-8.617e+02	14.27%	6.49%	54.3bp (60.0bp)	Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer(0.956) More Information | Similar Motifs Found	motif file (matrix)
5		1e-180	-4.153e+02	11.89%	6.65%	54.3bp (58.0bp)	Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer(0.976) More Information | Similar Motifs Found	motif file (matrix)
6		1e-156	-3.600e+02	5.00%	2.04%	53.1bp (62.5bp)	NFY(CCAAT)/Promoter/Homer(0.801) More Information | Similar Motifs Found	motif file (matrix)
7		1e-102	-2.351e+02	6.23%	3.36%	55.4bp (57.0bp)	MA0143.3_Sox2/Jaspar(0.901) More Information | Similar Motifs Found	motif file (matrix)
8		1e-100	-2.311e+02	0.30%	0.00%	52.8bp (0.0bp)	PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.598) More Information | Similar Motifs Found	motif file (matrix)
9		1e-96	-2.223e+02	0.29%	0.01%	45.2bp (47.6bp)	Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer(0.844) More Information | Similar Motifs Found	motif file (matrix)
10		1e-93	-2.152e+02	7.94%	4.76%	55.1bp (55.6bp)	TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer(0.937) More Information | Similar Motifs Found	motif file (matrix)
11		1e-92	-2.126e+02	1.40%	0.34%	54.2bp (56.1bp)	GFY(?)/Promoter/Homer(0.971) More Information | Similar Motifs Found	motif file (matrix)
12		1e-89	-2.060e+02	7.13%	4.19%	55.0bp (59.8bp)	MA0067.1_Pax2/Jaspar(0.850) More Information | Similar Motifs Found	motif file (matrix)
13		1e-82	-1.894e+02	0.34%	0.01%	44.9bp (31.7bp)	Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer(0.716) More Information | Similar Motifs Found	motif file (matrix)
14		1e-80	-1.855e+02	4.03%	2.01%	55.1bp (57.5bp)	NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer(0.996) More Information | Similar Motifs Found	motif file (matrix)
15		1e-72	-1.674e+02	15.08%	11.12%	56.0bp (56.5bp)	PB0205.1_Zic1_2/Jaspar(0.796) More Information | Similar Motifs Found	motif file (matrix)
16		1e-67	-1.557e+02	2.42%	1.04%	53.4bp (53.9bp)	Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.906) More Information | Similar Motifs Found	motif file (matrix)
17		1e-63	-1.464e+02	0.21%	0.01%	40.1bp (55.9bp)	MA0147.2_Myc/Jaspar(0.725) More Information | Similar Motifs Found	motif file (matrix)
18		1e-59	-1.369e+02	2.07%	0.88%	56.0bp (50.7bp)	MA0114.2_HNF4A/Jaspar(0.917) More Information | Similar Motifs Found	motif file (matrix)
19		1e-41	-9.550e+01	1.02%	0.36%	54.0bp (55.5bp)	MA0527.1_ZBTB33/Jaspar(0.897) More Information | Similar Motifs Found	motif file (matrix)
20		1e-39	-9.166e+01	0.18%	0.01%	58.1bp (64.2bp)	MA0164.1_Nr2e3/Jaspar(0.679) More Information | Similar Motifs Found	motif file (matrix)
21		1e-37	-8.733e+01	3.58%	2.20%	54.2bp (57.1bp)	Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.894) More Information | Similar Motifs Found	motif file (matrix)
22		1e-36	-8.384e+01	2.57%	1.45%	56.5bp (57.2bp)	Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer(0.909) More Information | Similar Motifs Found	motif file (matrix)
23		1e-31	-7.295e+01	0.15%	0.01%	49.8bp (0.0bp)	PB0207.1_Zic3_2/Jaspar(0.588) More Information | Similar Motifs Found	motif file (matrix)
24		1e-17	-4.077e+01	0.16%	0.02%	56.0bp (51.1bp)	MA0042.1_FOXI1/Jaspar(0.672) More Information | Similar Motifs Found	motif file (matrix)
25		1e-13	-3.127e+01	0.08%	0.01%	57.6bp (21.5bp)	Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer(0.631) More Information | Similar Motifs Found	motif file (matrix)
26 *		1e-8	-1.981e+01	0.31%	0.14%	57.4bp (62.6bp)	Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer(0.618) More Information | Similar Motifs Found	motif file (matrix)
27 *		1e-7	-1.621e+01	0.08%	0.02%	54.5bp (75.3bp)	PB0016.1_Foxj1_1/Jaspar(0.604) More Information | Similar Motifs Found	motif file (matrix)
28 *		1e-3	-8.005e+00	0.04%	0.01%	53.0bp (0.0bp)	PH0163.1_Six3/Jaspar(0.682) More Information | Similar Motifs Found	motif file (matrix)