Homer de novo Motif Results (Motifs.2/1E-15/PBS/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 216
Total background sequences = 154
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-35-8.097e+0115.74%1.08%55.0bp (12.1bp)PB0133.1_Hic1_2/Jaspar(0.913)
More Information | Similar Motifs Found
motif file (matrix)
2 1e-33-7.762e+0115.28%1.06%57.0bp (20.8bp)MA0522.1_Tcf3/Jaspar(0.699)
More Information | Similar Motifs Found
motif file (matrix)
3 1e-33-7.762e+0115.28%1.29%68.0bp (20.6bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.637)
More Information | Similar Motifs Found
motif file (matrix)
4 1e-30-6.950e+0117.59%1.75%55.3bp (41.4bp)MA0109.1_Hltf/Jaspar(0.669)
More Information | Similar Motifs Found
motif file (matrix)
5 1e-27-6.396e+0116.67%1.66%55.0bp (36.5bp)PB0024.1_Gcm1_1/Jaspar(0.658)
More Information | Similar Motifs Found
motif file (matrix)
6 1e-27-6.396e+0116.67%1.44%56.1bp (20.3bp)MA0594.1_Hoxa9/Jaspar(0.778)
More Information | Similar Motifs Found
motif file (matrix)
7 1e-26-6.143e+0112.96%1.15%55.0bp (0.0bp)Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer(0.595)
More Information | Similar Motifs Found
motif file (matrix)
8 1e-26-6.143e+0112.96%1.12%56.1bp (9.8bp)MA0056.1_MZF1_1-4/Jaspar(0.600)
More Information | Similar Motifs Found
motif file (matrix)
9 1e-25-5.856e+0115.74%1.86%46.7bp (10.1bp)PB0148.1_Mtf1_2/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
10 1e-25-5.856e+0115.74%1.37%57.0bp (13.1bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.858)
More Information | Similar Motifs Found
motif file (matrix)
11 1e-25-5.764e+0118.06%1.96%53.2bp (48.4bp)Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer(0.683)
More Information | Similar Motifs Found
motif file (matrix)
12 1e-24-5.591e+0115.28%1.85%44.9bp (16.7bp)MA0481.1_FOXP1/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
13 1e-24-5.591e+0115.28%1.54%53.4bp (39.5bp)Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer(0.662)
More Information | Similar Motifs Found
motif file (matrix)
14 1e-24-5.591e+0115.28%1.91%55.6bp (58.2bp)PH0097.1_Lhx6_2/Jaspar(0.759)
More Information | Similar Motifs Found
motif file (matrix)
15 1e-24-5.591e+0115.28%1.34%62.1bp (47.1bp)MA0503.1_Nkx2-5_(var.2)/Jaspar(0.808)
More Information | Similar Motifs Found
motif file (matrix)
16 1e-23-5.522e+0112.04%0.47%59.1bp (0.0bp)PB0048.1_Nkx3-1_1/Jaspar(0.729)
More Information | Similar Motifs Found
motif file (matrix)
17 1e-22-5.219e+0111.57%1.27%62.0bp (21.9bp)Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer(0.943)
More Information | Similar Motifs Found
motif file (matrix)
18 1e-21-4.919e+0111.11%1.27%56.9bp (31.7bp)PB0076.1_Sp4_1/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
19 1e-21-4.919e+0111.11%1.22%56.8bp (23.4bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.625)
More Information | Similar Motifs Found
motif file (matrix)
20 1e-21-4.919e+0111.11%0.96%56.4bp (37.1bp)NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer(0.804)
More Information | Similar Motifs Found
motif file (matrix)
21 1e-20-4.815e+0128.70%7.42%50.9bp (46.6bp)Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer(0.742)
More Information | Similar Motifs Found
motif file (matrix)
22 1e-20-4.756e+0118.06%2.94%56.5bp (53.6bp)MA0151.1_ARID3A/Jaspar(0.723)
More Information | Similar Motifs Found
motif file (matrix)
23 1e-20-4.624e+0110.65%0.46%52.5bp (17.9bp)Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.788)
More Information | Similar Motifs Found
motif file (matrix)
24 1e-19-4.567e+0113.43%1.38%50.5bp (51.7bp)PH0037.1_Hdx/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
25 1e-18-4.334e+0110.19%0.94%62.4bp (0.0bp)PB0182.1_Srf_2/Jaspar(0.869)
More Information | Similar Motifs Found
motif file (matrix)
26 1e-18-4.321e+0112.96%1.85%54.5bp (48.3bp)MA0504.1_NR2C2/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
27 1e-17-4.078e+0112.50%1.54%58.5bp (39.5bp)MA0124.1_NKX3-1/Jaspar(0.724)
More Information | Similar Motifs Found
motif file (matrix)
28 1e-17-4.049e+019.72%0.97%46.3bp (13.1bp)PB0091.1_Zbtb3_1/Jaspar(0.593)
More Information | Similar Motifs Found
motif file (matrix)
29 1e-17-4.049e+019.72%0.59%50.5bp (0.0bp)CHR/Cell-Cycle-Exp/Homer(0.637)
More Information | Similar Motifs Found
motif file (matrix)
30 1e-17-4.049e+019.72%1.23%45.4bp (39.9bp)PB0076.1_Sp4_1/Jaspar(0.693)
More Information | Similar Motifs Found
motif file (matrix)
31 1e-15-3.606e+0111.57%1.66%55.2bp (57.3bp)CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
32 1e-14-3.376e+0111.11%1.70%52.7bp (20.1bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.646)
More Information | Similar Motifs Found
motif file (matrix)
33 1e-14-3.305e+0112.96%2.27%58.8bp (27.7bp)PB0157.1_Rara_2/Jaspar(0.685)
More Information | Similar Motifs Found
motif file (matrix)
34 1e-13-3.151e+0110.65%1.63%53.0bp (59.5bp)PB0141.1_Isgf3g_2/Jaspar(0.675)
More Information | Similar Motifs Found
motif file (matrix)
35 1e-12-2.962e+017.87%1.08%52.7bp (21.1bp)MA0136.1_ELF5/Jaspar(0.752)
More Information | Similar Motifs Found
motif file (matrix)
36 *1e-11-2.715e+019.72%1.90%55.5bp (21.8bp)Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer(0.590)
More Information | Similar Motifs Found
motif file (matrix)
37 *1e-11-2.713e+0111.57%2.38%55.5bp (60.7bp)PB0203.1_Zfp691_2/Jaspar(0.657)
More Information | Similar Motifs Found
motif file (matrix)
38 *1e-11-2.705e+017.41%0.00%57.8bp (0.0bp)Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer(0.669)
More Information | Similar Motifs Found
motif file (matrix)
39 *1e-10-2.524e+0111.11%2.35%51.9bp (11.9bp)PB0181.1_Spdef_2/Jaspar(0.662)
More Information | Similar Motifs Found
motif file (matrix)
40 *1e-10-2.505e+019.26%1.39%57.3bp (1.0bp)MA0058.2_MAX/Jaspar(0.730)
More Information | Similar Motifs Found
motif file (matrix)
41 *1e-8-1.975e+016.02%0.92%44.9bp (0.0bp)PB0166.1_Sox12_2/Jaspar(0.654)
More Information | Similar Motifs Found
motif file (matrix)
42 *1e-7-1.651e+018.80%2.20%48.6bp (7.0bp)MA0497.1_MEF2C/Jaspar(0.645)
More Information | Similar Motifs Found
motif file (matrix)