Homer de novo Motif Results (Motifs.3.Old/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1000
Total background sequences = 2500
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-18-4.204e+011.50%0.00%369.7bp (0.0bp)MA0040.1_Foxq1/Jaspar(0.685)
More Information | Similar Motifs Found		motif file (matrix)
2 1e-17-3.990e+012.00%0.16%308.1bp (115.9bp)PB0067.1_Sox18_1/Jaspar(0.742)
More Information | Similar Motifs Found		motif file (matrix)
3 1e-15-3.484e+011.30%0.04%283.0bp (0.0bp)MA0091.1_TAL1::TCF3/Jaspar(0.692)
More Information | Similar Motifs Found		motif file (matrix)
4 1e-14-3.452e+012.00%0.20%340.7bp (150.0bp)SD0003.1_at_AC_acceptor/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
5 1e-13-3.078e+012.80%0.46%253.8bp (217.4bp)CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.599)
More Information | Similar Motifs Found		motif file (matrix)
6 1e-13-3.043e+012.00%0.24%261.3bp (353.4bp)PB0022.1_Gata5_1/Jaspar(0.798)
More Information | Similar Motifs Found		motif file (matrix)
7 1e-13-3.007e+016.31%2.16%210.9bp (412.9bp)Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer(0.671)
More Information | Similar Motifs Found		motif file (matrix)
8 1e-12-2.890e+011.60%0.14%290.5bp (499.5bp)SD0002.1_at_AC_acceptor/Jaspar(0.623)
More Information | Similar Motifs Found		motif file (matrix)
9 *1e-11-2.705e+011.70%0.18%352.7bp (295.8bp)PB0174.1_Sox30_2/Jaspar(0.619)
More Information | Similar Motifs Found		motif file (matrix)
10 *1e-11-2.705e+011.70%0.17%243.5bp (269.6bp)MA0100.2_Myb/Jaspar(0.750)
More Information | Similar Motifs Found		motif file (matrix)
11 *1e-11-2.584e+011.80%0.20%274.4bp (187.5bp)MA0467.1_Crx/Jaspar(0.626)
More Information | Similar Motifs Found		motif file (matrix)
12 *1e-10-2.462e+011.00%0.04%355.4bp (0.0bp)PH0084.1_Irx3_2/Jaspar(0.669)
More Information | Similar Motifs Found		motif file (matrix)
13 *1e-10-2.384e+013.00%0.71%290.5bp (339.2bp)PB0121.1_Foxj3_2/Jaspar(0.741)
More Information | Similar Motifs Found		motif file (matrix)
14 *1e-10-2.376e+011.40%0.14%248.9bp (265.6bp)GFY(?)/Promoter/Homer(0.636)
More Information | Similar Motifs Found		motif file (matrix)
15 *1e-10-2.376e+011.40%0.14%227.2bp (208.5bp)MA0030.1_FOXF2/Jaspar(0.649)
More Information | Similar Motifs Found		motif file (matrix)
16 *1e-10-2.361e+012.80%0.63%274.1bp (287.1bp)PB0028.1_Hbp1_1/Jaspar(0.677)
More Information | Similar Motifs Found		motif file (matrix)
17 *1e-10-2.361e+012.80%0.62%209.0bp (445.3bp)PB0001.1_Arid3a_1/Jaspar(0.706)
More Information | Similar Motifs Found		motif file (matrix)
18 *1e-10-2.340e+011.20%0.12%170.8bp (254.7bp)Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer(0.639)
More Information | Similar Motifs Found		motif file (matrix)
19 *1e-9-2.236e+011.50%0.19%358.5bp (359.6bp)PB0061.1_Sox11_1/Jaspar(0.739)
More Information | Similar Motifs Found		motif file (matrix)
20 *1e-9-2.107e+0134.93%26.22%288.5bp (334.4bp)MA0505.1_Nr5a2/Jaspar(0.709)
More Information | Similar Motifs Found		motif file (matrix)
21 *1e-9-2.087e+0114.61%8.76%308.0bp (376.9bp)POL008.1_DCE_S_I/Jaspar(0.629)
More Information | Similar Motifs Found		motif file (matrix)
22 *1e-8-2.068e+011.10%0.09%234.3bp (258.4bp)Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer(0.662)
More Information | Similar Motifs Found		motif file (matrix)
23 *1e-8-2.030e+011.90%0.36%230.7bp (278.7bp)MA0092.1_Hand1::Tcfe2a/Jaspar(0.626)
More Information | Similar Motifs Found		motif file (matrix)
24 *1e-8-1.978e+015.91%2.52%290.7bp (363.8bp)PB0099.1_Zfp691_1/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
25 *1e-8-1.890e+011.20%0.16%255.7bp (503.0bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.674)
More Information | Similar Motifs Found		motif file (matrix)
26 *1e-8-1.860e+0110.01%5.49%317.7bp (345.8bp)TATA-Box(TBP)/Promoter/Homer(0.679)
More Information | Similar Motifs Found		motif file (matrix)
27 *1e-8-1.844e+012.00%0.41%268.9bp (309.9bp)MA0137.3_STAT1/Jaspar(0.685)
More Information | Similar Motifs Found		motif file (matrix)
28 *1e-8-1.844e+012.00%0.41%264.6bp (495.1bp)PB0028.1_Hbp1_1/Jaspar(0.802)
More Information | Similar Motifs Found		motif file (matrix)
29 *1e-7-1.658e+011.10%0.14%226.8bp (416.8bp)SD0001.1_at_AC_acceptor/Jaspar(0.641)
More Information | Similar Motifs Found		motif file (matrix)
30 *1e-7-1.658e+011.10%0.14%199.1bp (301.3bp)PB0117.1_Eomes_2/Jaspar(0.548)
More Information | Similar Motifs Found		motif file (matrix)
31 *1e-6-1.435e+011.00%0.16%244.7bp (363.8bp)PB0059.1_Six6_1/Jaspar(0.656)
More Information | Similar Motifs Found		motif file (matrix)
32 *1e-5-1.355e+011.60%0.38%254.4bp (313.1bp)SD0001.1_at_AC_acceptor/Jaspar(0.632)
More Information | Similar Motifs Found		motif file (matrix)
33 *1e-5-1.338e+018.81%5.23%294.8bp (344.7bp)PH0041.1_Hmx1/Jaspar(0.637)
More Information | Similar Motifs Found		motif file (matrix)
34 *1e-5-1.276e+016.91%3.85%295.6bp (290.0bp)MA0032.1_FOXC1/Jaspar(0.662)
More Information | Similar Motifs Found		motif file (matrix)
35 *1e-5-1.222e+010.90%0.12%87.0bp (192.2bp)MA0503.1_Nkx2-5_(var.2)/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
36 *1e-5-1.222e+010.90%0.12%212.3bp (119.3bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.695)
More Information | Similar Motifs Found		motif file (matrix)
37 *1e-5-1.183e+011.00%0.16%205.3bp (327.5bp)PH0163.1_Six3/Jaspar(0.586)
More Information | Similar Motifs Found		motif file (matrix)
38 *1e-5-1.183e+011.00%0.18%272.9bp (203.9bp)POL013.1_MED-1/Jaspar(0.638)
More Information | Similar Motifs Found		motif file (matrix)
39 *1e-5-1.167e+011.20%0.28%375.8bp (315.5bp)Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.856)
More Information | Similar Motifs Found		motif file (matrix)
40 *1e-4-1.077e+010.70%0.09%181.4bp (25.0bp)PB0198.1_Zfp128_2/Jaspar(0.674)
More Information | Similar Motifs Found		motif file (matrix)
41 *1e-4-1.077e+010.70%0.11%230.7bp (507.4bp)MA0516.1_SP2/Jaspar(0.776)
More Information | Similar Motifs Found		motif file (matrix)
42 *1e-4-1.004e+011.10%0.25%211.5bp (436.9bp)MA0117.1_Mafb/Jaspar(0.665)
More Information | Similar Motifs Found		motif file (matrix)
43 *1e-4-9.713e+005.41%3.07%259.6bp (360.1bp)PB0110.1_Bcl6b_2/Jaspar(0.706)
More Information | Similar Motifs Found		motif file (matrix)
44 *1e-3-7.146e+000.40%0.07%151.4bp (63.9bp)Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.719)
More Information | Similar Motifs Found		motif file (matrix)
45 *1e-2-6.600e+000.70%0.17%160.4bp (209.8bp)MA0117.1_Mafb/Jaspar(0.725)
More Information | Similar Motifs Found		motif file (matrix)